Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pdlim3O70209 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pdlim3O70209 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim3O70209 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim3O70209 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim3O70209 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.71■□□□□ 0.11
Pdlim3O70209 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim3O70209 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim3O70209 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim3O70209 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim3O70209 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim3O70209 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.71■□□□□ 0.11
Pdlim3O70209 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim3O70209 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim3O70209 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC15.71■□□□□ 0.11
Pdlim3O70209 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim3O70209 Zfp783-201ENSMUST00000095946 670 ntBASIC15.71■□□□□ 0.11
Pdlim3O70209 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim3O70209 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim3O70209 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim3O70209 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim3O70209 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim3O70209 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim3O70209 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim3O70209 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim3O70209 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Pdlim3O70209 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.71■□□□□ 0.1
Pdlim3O70209 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Pdlim3O70209 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdlim3O70209 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.7■□□□□ 0.1
Pdlim3O70209 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdlim3O70209 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Pdlim3O70209 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdlim3O70209 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Pdlim3O70209 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Pdlim3O70209 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pdlim3O70209 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15.7■□□□□ 0.1
Pdlim3O70209 Gm7291-201ENSMUST00000199147 382 ntBASIC15.7■□□□□ 0.1
Pdlim3O70209 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdlim3O70209 Gm6365-201ENSMUST00000054711 744 ntBASIC15.7■□□□□ 0.1
Pdlim3O70209 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdlim3O70209 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Pdlim3O70209 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pdlim3O70209 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Pdlim3O70209 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdlim3O70209 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pdlim3O70209 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdlim3O70209 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdlim3O70209 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdlim3O70209 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdlim3O70209 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Pdlim3O70209 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pdlim3O70209 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdlim3O70209 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdlim3O70209 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdlim3O70209 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Pdlim3O70209 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdlim3O70209 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Pdlim3O70209 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Pdlim3O70209 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdlim3O70209 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdlim3O70209 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC15.69■□□□□ 0.1
Pdlim3O70209 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC15.69■□□□□ 0.1
Pdlim3O70209 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pdlim3O70209 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdlim3O70209 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdlim3O70209 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdlim3O70209 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdlim3O70209 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Pdlim3O70209 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pdlim3O70209 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Pdlim3O70209 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdlim3O70209 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pdlim3O70209 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdlim3O70209 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.68■□□□□ 0.1
Pdlim3O70209 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdlim3O70209 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdlim3O70209 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Pdlim3O70209 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pdlim3O70209 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdlim3O70209 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC15.68■□□□□ 0.1
Pdlim3O70209 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdlim3O70209 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdlim3O70209 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdlim3O70209 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdlim3O70209 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdlim3O70209 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.68■□□□□ 0.1
Pdlim3O70209 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Pdlim3O70209 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pdlim3O70209 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdlim3O70209 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdlim3O70209 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdlim3O70209 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pdlim3O70209 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdlim3O70209 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdlim3O70209 Gm42642-201ENSMUST00000200683 355 ntBASIC15.67■□□□□ 0.1
Pdlim3O70209 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdlim3O70209 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdlim3O70209 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Pdlim3O70209 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms