Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Mmp8O70138 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC21.13■□□□□ 0.97
Mmp8O70138 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Mmp8O70138 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Mmp8O70138 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Mmp8O70138 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Mmp8O70138 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Mmp8O70138 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC21.12■□□□□ 0.97
Mmp8O70138 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC21.12■□□□□ 0.97
Mmp8O70138 Gm30025-201ENSMUST00000218555 728 ntBASIC21.12■□□□□ 0.97
Mmp8O70138 AC120002.2-201ENSMUST00000220205 773 ntBASIC21.12■□□□□ 0.97
Mmp8O70138 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Mmp8O70138 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Mmp8O70138 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Mmp8O70138 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Mmp8O70138 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Mmp8O70138 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Mmp8O70138 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Mmp8O70138 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Mmp8O70138 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mmp8O70138 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mmp8O70138 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mmp8O70138 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mmp8O70138 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC21.11■□□□□ 0.97
Mmp8O70138 Mir6982-201ENSMUST00000184354 68 ntBASIC21.11■□□□□ 0.97
Mmp8O70138 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC21.11■□□□□ 0.97
Mmp8O70138 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC21.11■□□□□ 0.97
Mmp8O70138 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mmp8O70138 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Mmp8O70138 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mmp8O70138 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Mmp8O70138 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Mmp8O70138 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Mmp8O70138 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Mmp8O70138 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Mmp8O70138 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Mmp8O70138 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Mmp8O70138 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC21.1■□□□□ 0.97
Mmp8O70138 Gm11539-201ENSMUST00000119837 557 ntBASIC21.1■□□□□ 0.97
Mmp8O70138 Gm13436-201ENSMUST00000120418 567 ntBASIC21.1■□□□□ 0.97
Mmp8O70138 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Mmp8O70138 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC21.1■□□□□ 0.97
Mmp8O70138 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Mmp8O70138 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Mmp8O70138 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC21.1■□□□□ 0.97
Mmp8O70138 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Mmp8O70138 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Mmp8O70138 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Mmp8O70138 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
Mmp8O70138 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Mmp8O70138 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC21.09■□□□□ 0.97
Mmp8O70138 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Mmp8O70138 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Mmp8O70138 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Mmp8O70138 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Mmp8O70138 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC21.09■□□□□ 0.97
Mmp8O70138 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
Mmp8O70138 Gm15565-201ENSMUST00000118890 427 ntBASIC21.09■□□□□ 0.97
Mmp8O70138 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC21.09■□□□□ 0.97
Mmp8O70138 Gm4217-201ENSMUST00000182243 1002 ntBASIC21.09■□□□□ 0.97
Mmp8O70138 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Mmp8O70138 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Mmp8O70138 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Mmp8O70138 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Mmp8O70138 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC21.09■□□□□ 0.97
Mmp8O70138 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC21.09■□□□□ 0.97
Mmp8O70138 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Mmp8O70138 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Mmp8O70138 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Mmp8O70138 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Mmp8O70138 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Mmp8O70138 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Mmp8O70138 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Mmp8O70138 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Mmp8O70138 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Mmp8O70138 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Mmp8O70138 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC21.08■□□□□ 0.97
Mmp8O70138 Gm5898-201ENSMUST00000121016 2071 ntBASIC21.08■□□□□ 0.97
Mmp8O70138 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Mmp8O70138 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Mmp8O70138 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Mmp8O70138 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Mmp8O70138 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC21.08■□□□□ 0.97
Mmp8O70138 Gm27463-201ENSMUST00000183569 57 ntBASIC21.08■□□□□ 0.97
Mmp8O70138 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC21.08■□□□□ 0.97
Mmp8O70138 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Mmp8O70138 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Mmp8O70138 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Mmp8O70138 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Mmp8O70138 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Mmp8O70138 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Mmp8O70138 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Mmp8O70138 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Mmp8O70138 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Mmp8O70138 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Mmp8O70138 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Mmp8O70138 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Mmp8O70138 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Mmp8O70138 Gm43338-201ENSMUST00000198617 2223 ntBASIC21.07■□□□□ 0.96
Mmp8O70138 Gm13559-201ENSMUST00000120476 863 ntBASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms