Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SncaO55042 Gm7291-201ENSMUST00000199147 382 ntBASIC14.36□□□□□ -0.11
SncaO55042 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SncaO55042 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SncaO55042 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SncaO55042 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
SncaO55042 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SncaO55042 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SncaO55042 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SncaO55042 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SncaO55042 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SncaO55042 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SncaO55042 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SncaO55042 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SncaO55042 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SncaO55042 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SncaO55042 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SncaO55042 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SncaO55042 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SncaO55042 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SncaO55042 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SncaO55042 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SncaO55042 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SncaO55042 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.35□□□□□ -0.11
SncaO55042 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SncaO55042 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SncaO55042 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SncaO55042 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SncaO55042 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.35□□□□□ -0.11
SncaO55042 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SncaO55042 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SncaO55042 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SncaO55042 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SncaO55042 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SncaO55042 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SncaO55042 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SncaO55042 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SncaO55042 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SncaO55042 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SncaO55042 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SncaO55042 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.34□□□□□ -0.11
SncaO55042 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SncaO55042 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SncaO55042 Gm10418-201ENSMUST00000100943 576 ntBASIC14.34□□□□□ -0.11
SncaO55042 Gm6211-202ENSMUST00000167849 925 ntBASIC14.34□□□□□ -0.11
SncaO55042 Gm38285-201ENSMUST00000192928 922 ntBASIC14.34□□□□□ -0.11
SncaO55042 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SncaO55042 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
SncaO55042 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SncaO55042 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
SncaO55042 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SncaO55042 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SncaO55042 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.34□□□□□ -0.11
SncaO55042 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.34□□□□□ -0.11
SncaO55042 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SncaO55042 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SncaO55042 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SncaO55042 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SncaO55042 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SncaO55042 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SncaO55042 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SncaO55042 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SncaO55042 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SncaO55042 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SncaO55042 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SncaO55042 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SncaO55042 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
SncaO55042 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC14.33□□□□□ -0.12
SncaO55042 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SncaO55042 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC14.33□□□□□ -0.12
SncaO55042 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SncaO55042 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SncaO55042 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.33□□□□□ -0.12
SncaO55042 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SncaO55042 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.33□□□□□ -0.12
SncaO55042 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SncaO55042 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SncaO55042 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SncaO55042 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SncaO55042 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SncaO55042 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SncaO55042 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.33□□□□□ -0.12
SncaO55042 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SncaO55042 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SncaO55042 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SncaO55042 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
SncaO55042 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SncaO55042 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SncaO55042 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SncaO55042 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SncaO55042 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SncaO55042 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.32□□□□□ -0.12
SncaO55042 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SncaO55042 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SncaO55042 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SncaO55042 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SncaO55042 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.32□□□□□ -0.12
SncaO55042 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SncaO55042 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.32□□□□□ -0.12
SncaO55042 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms