Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smarce1O54941 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smarce1O54941 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smarce1O54941 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smarce1O54941 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smarce1O54941 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smarce1O54941 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smarce1O54941 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smarce1O54941 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smarce1O54941 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.62■□□□□ 0.89
Smarce1O54941 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smarce1O54941 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.62■□□□□ 0.89
Smarce1O54941 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smarce1O54941 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smarce1O54941 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smarce1O54941 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Smarce1O54941 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smarce1O54941 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smarce1O54941 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smarce1O54941 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smarce1O54941 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Smarce1O54941 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Smarce1O54941 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smarce1O54941 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.61■□□□□ 0.89
Smarce1O54941 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smarce1O54941 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Smarce1O54941 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smarce1O54941 Gm10138-203ENSMUST00000206952 366 ntBASIC20.61■□□□□ 0.89
Smarce1O54941 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smarce1O54941 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smarce1O54941 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Smarce1O54941 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smarce1O54941 Gm16401-202ENSMUST00000197463 2074 ntBASIC20.6■□□□□ 0.89
Smarce1O54941 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smarce1O54941 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Smarce1O54941 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Smarce1O54941 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smarce1O54941 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Smarce1O54941 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.6■□□□□ 0.89
Smarce1O54941 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Smarce1O54941 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.6■□□□□ 0.89
Smarce1O54941 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.6■□□□□ 0.89
Smarce1O54941 Mtag2-201ENSMUST00000058665 714 ntBASIC20.6■□□□□ 0.89
Smarce1O54941 Gm4968-201ENSMUST00000071458 858 ntBASIC20.6■□□□□ 0.89
Smarce1O54941 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.6■□□□□ 0.89
Smarce1O54941 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Smarce1O54941 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Smarce1O54941 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smarce1O54941 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Smarce1O54941 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smarce1O54941 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smarce1O54941 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Smarce1O54941 Gm12933-201ENSMUST00000120203 872 ntBASIC20.59■□□□□ 0.89
Smarce1O54941 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Smarce1O54941 Gm2559-201ENSMUST00000201323 363 ntBASIC20.59■□□□□ 0.89
Smarce1O54941 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20.59■□□□□ 0.89
Smarce1O54941 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Smarce1O54941 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smarce1O54941 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smarce1O54941 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smarce1O54941 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Smarce1O54941 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smarce1O54941 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Smarce1O54941 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smarce1O54941 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smarce1O54941 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smarce1O54941 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smarce1O54941 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Smarce1O54941 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Smarce1O54941 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smarce1O54941 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Smarce1O54941 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smarce1O54941 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Smarce1O54941 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smarce1O54941 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smarce1O54941 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smarce1O54941 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Smarce1O54941 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarce1O54941 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.57■□□□□ 0.88
Smarce1O54941 Gm5408-201ENSMUST00000197998 747 ntBASIC20.57■□□□□ 0.88
Smarce1O54941 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.57■□□□□ 0.88
Smarce1O54941 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Smarce1O54941 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarce1O54941 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Smarce1O54941 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarce1O54941 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarce1O54941 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarce1O54941 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarce1O54941 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC20.57■□□□□ 0.88
Smarce1O54941 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarce1O54941 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.56■□□□□ 0.88
Smarce1O54941 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Smarce1O54941 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Smarce1O54941 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Smarce1O54941 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Smarce1O54941 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Smarce1O54941 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smarce1O54941 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smarce1O54941 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smarce1O54941 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms