Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sptlc1O35704 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Sptlc1O35704 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sptlc1O35704 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sptlc1O35704 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sptlc1O35704 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.92■□□□□ 0.62
Sptlc1O35704 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sptlc1O35704 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sptlc1O35704 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sptlc1O35704 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sptlc1O35704 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sptlc1O35704 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sptlc1O35704 Gm27704-201ENSMUST00000185094 107 ntBASIC18.92■□□□□ 0.62
Sptlc1O35704 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sptlc1O35704 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sptlc1O35704 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sptlc1O35704 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sptlc1O35704 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sptlc1O35704 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.92■□□□□ 0.62
Sptlc1O35704 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sptlc1O35704 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sptlc1O35704 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.91■□□□□ 0.62
Sptlc1O35704 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sptlc1O35704 Gm27741-201ENSMUST00000185060 237 ntBASIC18.91■□□□□ 0.62
Sptlc1O35704 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sptlc1O35704 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sptlc1O35704 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.91■□□□□ 0.62
Sptlc1O35704 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sptlc1O35704 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sptlc1O35704 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sptlc1O35704 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Sptlc1O35704 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sptlc1O35704 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sptlc1O35704 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sptlc1O35704 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sptlc1O35704 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.9■□□□□ 0.62
Sptlc1O35704 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sptlc1O35704 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Sptlc1O35704 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sptlc1O35704 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sptlc1O35704 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sptlc1O35704 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sptlc1O35704 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sptlc1O35704 Gm11355-201ENSMUST00000121120 306 ntBASIC18.9■□□□□ 0.62
Sptlc1O35704 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sptlc1O35704 Gm26039-201ENSMUST00000158152 144 ntBASIC18.9■□□□□ 0.62
Sptlc1O35704 Gm17808-201ENSMUST00000200859 894 ntBASIC18.9■□□□□ 0.62
Sptlc1O35704 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.9■□□□□ 0.62
Sptlc1O35704 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sptlc1O35704 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sptlc1O35704 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sptlc1O35704 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.9■□□□□ 0.62
Sptlc1O35704 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sptlc1O35704 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.9■□□□□ 0.62
Sptlc1O35704 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sptlc1O35704 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sptlc1O35704 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sptlc1O35704 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sptlc1O35704 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.61
Sptlc1O35704 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sptlc1O35704 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sptlc1O35704 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.89■□□□□ 0.61
Sptlc1O35704 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sptlc1O35704 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Sptlc1O35704 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sptlc1O35704 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sptlc1O35704 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sptlc1O35704 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sptlc1O35704 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sptlc1O35704 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sptlc1O35704 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sptlc1O35704 Grk6-206ENSMUST00000224995 2971 ntBASIC18.89■□□□□ 0.61
Sptlc1O35704 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Sptlc1O35704 Actl10-202ENSMUST00000226583 1501 ntBASIC18.89■□□□□ 0.61
Sptlc1O35704 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sptlc1O35704 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sptlc1O35704 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sptlc1O35704 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sptlc1O35704 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sptlc1O35704 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sptlc1O35704 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sptlc1O35704 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sptlc1O35704 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.88■□□□□ 0.61
Sptlc1O35704 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sptlc1O35704 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sptlc1O35704 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sptlc1O35704 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.88■□□□□ 0.61
Sptlc1O35704 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sptlc1O35704 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Sptlc1O35704 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sptlc1O35704 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sptlc1O35704 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sptlc1O35704 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Sptlc1O35704 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sptlc1O35704 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sptlc1O35704 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sptlc1O35704 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sptlc1O35704 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sptlc1O35704 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sptlc1O35704 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms