Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.76■□□□□ 0.11
Matn3O35701 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Matn3O35701 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Matn3O35701 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Matn3O35701 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Matn3O35701 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Matn3O35701 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Matn3O35701 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Matn3O35701 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Matn3O35701 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.75■□□□□ 0.11
Matn3O35701 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Matn3O35701 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Matn3O35701 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Matn3O35701 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Matn3O35701 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Matn3O35701 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Matn3O35701 Gm43060-201ENSMUST00000200621 289 ntBASIC15.75■□□□□ 0.11
Matn3O35701 AC164629.5-201ENSMUST00000220387 632 ntBASIC15.75■□□□□ 0.11
Matn3O35701 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Matn3O35701 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Matn3O35701 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Matn3O35701 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Matn3O35701 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Matn3O35701 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Matn3O35701 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Matn3O35701 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Matn3O35701 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Matn3O35701 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Matn3O35701 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Matn3O35701 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Matn3O35701 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Matn3O35701 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Matn3O35701 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Matn3O35701 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Matn3O35701 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Matn3O35701 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Matn3O35701 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Matn3O35701 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Matn3O35701 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Matn3O35701 Gm22325-201ENSMUST00000158904 308 ntBASIC15.74■□□□□ 0.11
Matn3O35701 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC15.74■□□□□ 0.11
Matn3O35701 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Matn3O35701 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Matn3O35701 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Matn3O35701 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Matn3O35701 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Matn3O35701 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Matn3O35701 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Matn3O35701 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Matn3O35701 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
Matn3O35701 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Matn3O35701 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Matn3O35701 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Matn3O35701 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Matn3O35701 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Matn3O35701 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Matn3O35701 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Matn3O35701 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Matn3O35701 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Matn3O35701 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.73■□□□□ 0.11
Matn3O35701 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC15.73■□□□□ 0.11
Matn3O35701 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Matn3O35701 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Matn3O35701 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Matn3O35701 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Matn3O35701 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Matn3O35701 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Matn3O35701 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Matn3O35701 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Matn3O35701 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Matn3O35701 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Matn3O35701 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Matn3O35701 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Matn3O35701 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.72■□□□□ 0.11
Matn3O35701 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Matn3O35701 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Matn3O35701 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Matn3O35701 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Matn3O35701 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Matn3O35701 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Matn3O35701 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Matn3O35701 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.72■□□□□ 0.11
Matn3O35701 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Matn3O35701 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Matn3O35701 Gm10493-201ENSMUST00000097270 612 ntBASIC15.72■□□□□ 0.11
Matn3O35701 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Matn3O35701 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.72■□□□□ 0.11
Matn3O35701 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Matn3O35701 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Matn3O35701 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.72■□□□□ 0.11
Matn3O35701 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Matn3O35701 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Matn3O35701 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Matn3O35701 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Matn3O35701 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC15.72■□□□□ 0.11
Matn3O35701 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC15.71■□□□□ 0.11
Matn3O35701 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Matn3O35701 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Matn3O35701 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Matn3O35701 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms