Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Gm3375-201ENSMUST00000203929 796 ntBASIC16.89■□□□□ 0.29
Npc1O35604 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Npc1O35604 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Npc1O35604 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Npc1O35604 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Npc1O35604 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Npc1O35604 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Npc1O35604 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Npc1O35604 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Npc1O35604 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Npc1O35604 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.89■□□□□ 0.29
Npc1O35604 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Npc1O35604 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Npc1O35604 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Npc1O35604 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Npc1O35604 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Npc1O35604 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Npc1O35604 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Npc1O35604 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Npc1O35604 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Npc1O35604 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Npc1O35604 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.88■□□□□ 0.29
Npc1O35604 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Npc1O35604 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.88■□□□□ 0.29
Npc1O35604 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.88■□□□□ 0.29
Npc1O35604 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Npc1O35604 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Npc1O35604 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Npc1O35604 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Npc1O35604 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Npc1O35604 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Npc1O35604 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Npc1O35604 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Npc1O35604 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Npc1O35604 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Npc1O35604 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Npc1O35604 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Npc1O35604 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Npc1O35604 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Npc1O35604 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Npc1O35604 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Npc1O35604 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Npc1O35604 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Npc1O35604 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.87■□□□□ 0.29
Npc1O35604 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Npc1O35604 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.87■□□□□ 0.29
Npc1O35604 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Npc1O35604 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Npc1O35604 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Npc1O35604 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Npc1O35604 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Npc1O35604 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Npc1O35604 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Npc1O35604 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Npc1O35604 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Npc1O35604 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Npc1O35604 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Npc1O35604 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Npc1O35604 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Npc1O35604 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Npc1O35604 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Npc1O35604 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Npc1O35604 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Npc1O35604 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Npc1O35604 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.86■□□□□ 0.29
Npc1O35604 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Npc1O35604 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.86■□□□□ 0.29
Npc1O35604 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Npc1O35604 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.86■□□□□ 0.29
Npc1O35604 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.86■□□□□ 0.29
Npc1O35604 Gm30025-201ENSMUST00000218555 728 ntBASIC16.86■□□□□ 0.29
Npc1O35604 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Npc1O35604 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Npc1O35604 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Npc1O35604 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Npc1O35604 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Npc1O35604 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Npc1O35604 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Npc1O35604 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Npc1O35604 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Npc1O35604 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Npc1O35604 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Npc1O35604 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Npc1O35604 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Npc1O35604 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Npc1O35604 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Npc1O35604 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Npc1O35604 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Npc1O35604 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Npc1O35604 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Npc1O35604 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Npc1O35604 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Npc1O35604 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Npc1O35604 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Npc1O35604 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Npc1O35604 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Npc1O35604 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Npc1O35604 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.85■□□□□ 0.29
Npc1O35604 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Npc1O35604 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms