Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Stx1aO35526 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Stx1aO35526 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Stx1aO35526 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Stx1aO35526 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Stx1aO35526 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Stx1aO35526 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Stx1aO35526 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Stx1aO35526 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Stx1aO35526 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Stx1aO35526 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Stx1aO35526 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Stx1aO35526 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Stx1aO35526 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Stx1aO35526 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Stx1aO35526 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Stx1aO35526 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.48■□□□□ 0.71
Stx1aO35526 Gm6211-202ENSMUST00000167849 925 ntBASIC19.48■□□□□ 0.71
Stx1aO35526 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.48■□□□□ 0.71
Stx1aO35526 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Stx1aO35526 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Stx1aO35526 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Stx1aO35526 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Stx1aO35526 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Stx1aO35526 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Stx1aO35526 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Stx1aO35526 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Stx1aO35526 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Stx1aO35526 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Stx1aO35526 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Stx1aO35526 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Stx1aO35526 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Stx1aO35526 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Stx1aO35526 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.47■□□□□ 0.71
Stx1aO35526 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.47■□□□□ 0.71
Stx1aO35526 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Stx1aO35526 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
Stx1aO35526 Gm44549-201ENSMUST00000208351 577 ntBASIC19.47■□□□□ 0.71
Stx1aO35526 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Stx1aO35526 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Stx1aO35526 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Stx1aO35526 Flg-201ENSMUST00000050758 1488 ntBASIC19.47■□□□□ 0.71
Stx1aO35526 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Stx1aO35526 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Stx1aO35526 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Stx1aO35526 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Stx1aO35526 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Stx1aO35526 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Stx1aO35526 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.46■□□□□ 0.71
Stx1aO35526 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Stx1aO35526 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Stx1aO35526 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Stx1aO35526 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.46■□□□□ 0.71
Stx1aO35526 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Stx1aO35526 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Stx1aO35526 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Stx1aO35526 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Stx1aO35526 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Stx1aO35526 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Stx1aO35526 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Stx1aO35526 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Stx1aO35526 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Stx1aO35526 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC19.45■□□□□ 0.7
Stx1aO35526 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Stx1aO35526 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Stx1aO35526 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Stx1aO35526 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Stx1aO35526 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Stx1aO35526 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Stx1aO35526 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Stx1aO35526 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Stx1aO35526 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Stx1aO35526 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Stx1aO35526 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Stx1aO35526 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Stx1aO35526 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.44■□□□□ 0.7
Stx1aO35526 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.44■□□□□ 0.7
Stx1aO35526 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Stx1aO35526 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Stx1aO35526 Gm7290-201ENSMUST00000104990 617 ntBASIC19.44■□□□□ 0.7
Stx1aO35526 Gm12918-201ENSMUST00000120234 636 ntBASIC19.44■□□□□ 0.7
Stx1aO35526 Gm15710-201ENSMUST00000121821 636 ntBASIC19.44■□□□□ 0.7
Stx1aO35526 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Stx1aO35526 Gm5075-201ENSMUST00000196916 622 ntBASIC19.44■□□□□ 0.7
Stx1aO35526 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.44■□□□□ 0.7
Stx1aO35526 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.44■□□□□ 0.7
Stx1aO35526 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Stx1aO35526 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Stx1aO35526 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Stx1aO35526 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Stx1aO35526 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Stx1aO35526 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Stx1aO35526 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Stx1aO35526 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Stx1aO35526 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.43■□□□□ 0.7
Stx1aO35526 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Stx1aO35526 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.43■□□□□ 0.7
Stx1aO35526 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Stx1aO35526 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.43■□□□□ 0.7
Stx1aO35526 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms