Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.58
Tnfrsf11aO35305 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Tnfrsf11aO35305 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.58
Tnfrsf11aO35305 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Tnfrsf11aO35305 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Tnfrsf11aO35305 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tnfrsf11aO35305 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tnfrsf11aO35305 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tnfrsf11aO35305 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tnfrsf11aO35305 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.64■□□□□ 0.57
Tnfrsf11aO35305 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Tnfrsf11aO35305 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.64■□□□□ 0.57
Tnfrsf11aO35305 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tnfrsf11aO35305 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.64■□□□□ 0.57
Tnfrsf11aO35305 Odf3b-204ENSMUST00000227834 930 ntBASIC18.64■□□□□ 0.57
Tnfrsf11aO35305 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tnfrsf11aO35305 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tnfrsf11aO35305 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tnfrsf11aO35305 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tnfrsf11aO35305 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Tnfrsf11aO35305 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.64■□□□□ 0.57
Tnfrsf11aO35305 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tnfrsf11aO35305 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tnfrsf11aO35305 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Tnfrsf11aO35305 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfrsf11aO35305 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfrsf11aO35305 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfrsf11aO35305 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.63■□□□□ 0.57
Tnfrsf11aO35305 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfrsf11aO35305 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Tnfrsf11aO35305 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfrsf11aO35305 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfrsf11aO35305 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfrsf11aO35305 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfrsf11aO35305 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfrsf11aO35305 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfrsf11aO35305 Gm37055-201ENSMUST00000191866 133 ntBASIC18.62■□□□□ 0.57
Tnfrsf11aO35305 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfrsf11aO35305 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfrsf11aO35305 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Tnfrsf11aO35305 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.62■□□□□ 0.57
Tnfrsf11aO35305 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfrsf11aO35305 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfrsf11aO35305 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Tnfrsf11aO35305 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfrsf11aO35305 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfrsf11aO35305 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfrsf11aO35305 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfrsf11aO35305 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfrsf11aO35305 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Tnfrsf11aO35305 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfrsf11aO35305 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfrsf11aO35305 Gm7638-201ENSMUST00000121348 967 ntBASIC18.61■□□□□ 0.57
Tnfrsf11aO35305 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.61■□□□□ 0.57
Tnfrsf11aO35305 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfrsf11aO35305 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfrsf11aO35305 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfrsf11aO35305 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfrsf11aO35305 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfrsf11aO35305 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfrsf11aO35305 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfrsf11aO35305 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfrsf11aO35305 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfrsf11aO35305 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfrsf11aO35305 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Tnfrsf11aO35305 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.61■□□□□ 0.57
Tnfrsf11aO35305 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfrsf11aO35305 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.6■□□□□ 0.57
Tnfrsf11aO35305 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfrsf11aO35305 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Tnfrsf11aO35305 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfrsf11aO35305 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfrsf11aO35305 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Tnfrsf11aO35305 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfrsf11aO35305 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.6■□□□□ 0.57
Tnfrsf11aO35305 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfrsf11aO35305 Gm5417-201ENSMUST00000079706 384 ntBASIC18.6■□□□□ 0.57
Tnfrsf11aO35305 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfrsf11aO35305 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfrsf11aO35305 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfrsf11aO35305 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfrsf11aO35305 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfrsf11aO35305 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfrsf11aO35305 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfrsf11aO35305 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.59■□□□□ 0.57
Tnfrsf11aO35305 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfrsf11aO35305 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfrsf11aO35305 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfrsf11aO35305 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Tnfrsf11aO35305 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfrsf11aO35305 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.58■□□□□ 0.57
Tnfrsf11aO35305 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tnfrsf11aO35305 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.58■□□□□ 0.57
Tnfrsf11aO35305 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
Tnfrsf11aO35305 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tnfrsf11aO35305 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tnfrsf11aO35305 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tnfrsf11aO35305 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tnfrsf11aO35305 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Tnfrsf11aO35305 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms