Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AlyrefO08583 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
AlyrefO08583 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
AlyrefO08583 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
AlyrefO08583 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
AlyrefO08583 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
AlyrefO08583 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
AlyrefO08583 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AlyrefO08583 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AlyrefO08583 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.47■□□□□ 0.39
AlyrefO08583 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
AlyrefO08583 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
AlyrefO08583 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
AlyrefO08583 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
AlyrefO08583 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
AlyrefO08583 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
AlyrefO08583 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AlyrefO08583 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
AlyrefO08583 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.46■□□□□ 0.39
AlyrefO08583 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
AlyrefO08583 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
AlyrefO08583 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
AlyrefO08583 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AlyrefO08583 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
AlyrefO08583 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AlyrefO08583 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
AlyrefO08583 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
AlyrefO08583 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AlyrefO08583 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.45■□□□□ 0.38
AlyrefO08583 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
AlyrefO08583 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AlyrefO08583 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AlyrefO08583 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
AlyrefO08583 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
AlyrefO08583 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AlyrefO08583 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AlyrefO08583 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AlyrefO08583 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.44■□□□□ 0.38
AlyrefO08583 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
AlyrefO08583 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AlyrefO08583 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AlyrefO08583 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AlyrefO08583 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.44■□□□□ 0.38
AlyrefO08583 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
AlyrefO08583 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.44■□□□□ 0.38
AlyrefO08583 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
AlyrefO08583 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
AlyrefO08583 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AlyrefO08583 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AlyrefO08583 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AlyrefO08583 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AlyrefO08583 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AlyrefO08583 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AlyrefO08583 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AlyrefO08583 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
AlyrefO08583 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AlyrefO08583 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
AlyrefO08583 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AlyrefO08583 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.43■□□□□ 0.38
AlyrefO08583 Gm7213-201ENSMUST00000215977 950 ntBASIC17.43■□□□□ 0.38
AlyrefO08583 Gm5364-201ENSMUST00000216789 889 ntBASIC17.43■□□□□ 0.38
AlyrefO08583 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
AlyrefO08583 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AlyrefO08583 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
AlyrefO08583 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AlyrefO08583 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
AlyrefO08583 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
AlyrefO08583 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
AlyrefO08583 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
AlyrefO08583 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
AlyrefO08583 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AlyrefO08583 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
AlyrefO08583 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
AlyrefO08583 Gm12895-201ENSMUST00000122214 226 ntBASIC17.42■□□□□ 0.38
AlyrefO08583 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.42■□□□□ 0.38
AlyrefO08583 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
AlyrefO08583 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.42■□□□□ 0.38
AlyrefO08583 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
AlyrefO08583 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
AlyrefO08583 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
AlyrefO08583 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
AlyrefO08583 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
AlyrefO08583 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AlyrefO08583 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
AlyrefO08583 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AlyrefO08583 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AlyrefO08583 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AlyrefO08583 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
AlyrefO08583 Gm11779-201ENSMUST00000118541 368 ntBASIC17.41■□□□□ 0.38
AlyrefO08583 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.41■□□□□ 0.38
AlyrefO08583 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
AlyrefO08583 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.41■□□□□ 0.38
AlyrefO08583 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AlyrefO08583 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
AlyrefO08583 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
AlyrefO08583 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AlyrefO08583 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AlyrefO08583 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AlyrefO08583 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AlyrefO08583 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms