Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Shisa8J3QNX5 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shisa8J3QNX5 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Shisa8J3QNX5 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shisa8J3QNX5 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Shisa8J3QNX5 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Shisa8J3QNX5 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shisa8J3QNX5 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Shisa8J3QNX5 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shisa8J3QNX5 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shisa8J3QNX5 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shisa8J3QNX5 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Shisa8J3QNX5 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Shisa8J3QNX5 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Shisa8J3QNX5 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shisa8J3QNX5 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shisa8J3QNX5 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shisa8J3QNX5 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.81■□□□□ 0.12
Shisa8J3QNX5 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Shisa8J3QNX5 Mir8112-201ENSMUST00000184382 131 ntBASIC15.81■□□□□ 0.12
Shisa8J3QNX5 Gm42778-201ENSMUST00000199644 553 ntBASIC15.81■□□□□ 0.12
Shisa8J3QNX5 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.81■□□□□ 0.12
Shisa8J3QNX5 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shisa8J3QNX5 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shisa8J3QNX5 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Shisa8J3QNX5 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shisa8J3QNX5 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shisa8J3QNX5 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Shisa8J3QNX5 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.8■□□□□ 0.12
Shisa8J3QNX5 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shisa8J3QNX5 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shisa8J3QNX5 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Shisa8J3QNX5 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shisa8J3QNX5 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Shisa8J3QNX5 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Shisa8J3QNX5 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Shisa8J3QNX5 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shisa8J3QNX5 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shisa8J3QNX5 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shisa8J3QNX5 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shisa8J3QNX5 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shisa8J3QNX5 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.8■□□□□ 0.12
Shisa8J3QNX5 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shisa8J3QNX5 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Shisa8J3QNX5 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC15.8■□□□□ 0.12
Shisa8J3QNX5 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Shisa8J3QNX5 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shisa8J3QNX5 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
Shisa8J3QNX5 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC15.8■□□□□ 0.12
Shisa8J3QNX5 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.8■□□□□ 0.12
Shisa8J3QNX5 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shisa8J3QNX5 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shisa8J3QNX5 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.8■□□□□ 0.12
Shisa8J3QNX5 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shisa8J3QNX5 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Shisa8J3QNX5 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.8■□□□□ 0.12
Shisa8J3QNX5 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shisa8J3QNX5 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shisa8J3QNX5 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shisa8J3QNX5 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Shisa8J3QNX5 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shisa8J3QNX5 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shisa8J3QNX5 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shisa8J3QNX5 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shisa8J3QNX5 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shisa8J3QNX5 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shisa8J3QNX5 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shisa8J3QNX5 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC15.79■□□□□ 0.12
Shisa8J3QNX5 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Shisa8J3QNX5 Gm29791-202ENSMUST00000207888 369 ntBASIC15.79■□□□□ 0.12
Shisa8J3QNX5 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shisa8J3QNX5 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shisa8J3QNX5 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
Shisa8J3QNX5 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Shisa8J3QNX5 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Shisa8J3QNX5 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Shisa8J3QNX5 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Shisa8J3QNX5 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shisa8J3QNX5 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Shisa8J3QNX5 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Shisa8J3QNX5 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Shisa8J3QNX5 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.78■□□□□ 0.12
Shisa8J3QNX5 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Shisa8J3QNX5 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Shisa8J3QNX5 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shisa8J3QNX5 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shisa8J3QNX5 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Shisa8J3QNX5 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shisa8J3QNX5 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC15.78■□□□□ 0.12
Shisa8J3QNX5 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shisa8J3QNX5 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shisa8J3QNX5 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shisa8J3QNX5 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shisa8J3QNX5 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shisa8J3QNX5 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
Shisa8J3QNX5 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shisa8J3QNX5 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shisa8J3QNX5 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Shisa8J3QNX5 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Shisa8J3QNX5 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms