Protein–RNA interactions for Protein: J3QNG1

Gm6408, Predicted gene 6408, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm6408J3QNG1 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm6408J3QNG1 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm6408J3QNG1 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm6408J3QNG1 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Gm6408J3QNG1 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm6408J3QNG1 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Gm6408J3QNG1 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm6408J3QNG1 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gm6408J3QNG1 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm6408J3QNG1 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm6408J3QNG1 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.31■□□□□ 0.36
Gm6408J3QNG1 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Gm6408J3QNG1 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gm6408J3QNG1 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm6408J3QNG1 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.31■□□□□ 0.36
Gm6408J3QNG1 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Gm6408J3QNG1 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm6408J3QNG1 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm6408J3QNG1 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.31■□□□□ 0.36
Gm6408J3QNG1 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.31■□□□□ 0.36
Gm6408J3QNG1 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.31■□□□□ 0.36
Gm6408J3QNG1 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm6408J3QNG1 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm6408J3QNG1 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm6408J3QNG1 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm6408J3QNG1 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.31■□□□□ 0.36
Gm6408J3QNG1 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.31■□□□□ 0.36
Gm6408J3QNG1 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm6408J3QNG1 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm6408J3QNG1 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Gm6408J3QNG1 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm6408J3QNG1 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm6408J3QNG1 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.3■□□□□ 0.36
Gm6408J3QNG1 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm6408J3QNG1 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm6408J3QNG1 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.3■□□□□ 0.36
Gm6408J3QNG1 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.3■□□□□ 0.36
Gm6408J3QNG1 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm6408J3QNG1 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Gm6408J3QNG1 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Gm6408J3QNG1 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm6408J3QNG1 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Gm6408J3QNG1 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.3■□□□□ 0.36
Gm6408J3QNG1 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm6408J3QNG1 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.29■□□□□ 0.36
Gm6408J3QNG1 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm6408J3QNG1 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Gm6408J3QNG1 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.29■□□□□ 0.36
Gm6408J3QNG1 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Gm6408J3QNG1 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Gm6408J3QNG1 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm6408J3QNG1 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm6408J3QNG1 Gm15039-201ENSMUST00000118914 875 ntBASIC17.29■□□□□ 0.36
Gm6408J3QNG1 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.29■□□□□ 0.36
Gm6408J3QNG1 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm6408J3QNG1 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm6408J3QNG1 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Gm6408J3QNG1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Gm6408J3QNG1 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm6408J3QNG1 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm6408J3QNG1 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.29■□□□□ 0.36
Gm6408J3QNG1 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm6408J3QNG1 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm6408J3QNG1 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.28■□□□□ 0.36
Gm6408J3QNG1 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm6408J3QNG1 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Gm6408J3QNG1 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm6408J3QNG1 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Gm6408J3QNG1 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm6408J3QNG1 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm6408J3QNG1 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Gm6408J3QNG1 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Gm6408J3QNG1 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm6408J3QNG1 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm6408J3QNG1 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Gm6408J3QNG1 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm6408J3QNG1 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Gm6408J3QNG1 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm6408J3QNG1 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Gm6408J3QNG1 Gm6576-201ENSMUST00000169678 883 ntBASIC17.27■□□□□ 0.36
Gm6408J3QNG1 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm6408J3QNG1 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm6408J3QNG1 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
Gm6408J3QNG1 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm6408J3QNG1 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm6408J3QNG1 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm6408J3QNG1 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm6408J3QNG1 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm6408J3QNG1 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm6408J3QNG1 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gm6408J3QNG1 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.26■□□□□ 0.35
Gm6408J3QNG1 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm6408J3QNG1 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm6408J3QNG1 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm6408J3QNG1 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gm6408J3QNG1 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm6408J3QNG1 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gm6408J3QNG1 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm6408J3QNG1 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.26■□□□□ 0.35
Gm6408J3QNG1 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms