Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.54■□□□□ 0.4
Ccdc188F6WEU2 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ccdc188F6WEU2 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc188F6WEU2 Gm15165-201ENSMUST00000118140 502 ntBASIC17.54■□□□□ 0.4
Ccdc188F6WEU2 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc188F6WEU2 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Ccdc188F6WEU2 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC17.54■□□□□ 0.4
Ccdc188F6WEU2 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc188F6WEU2 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc188F6WEU2 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc188F6WEU2 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc188F6WEU2 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc188F6WEU2 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc188F6WEU2 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc188F6WEU2 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc188F6WEU2 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.54■□□□□ 0.4
Ccdc188F6WEU2 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc188F6WEU2 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc188F6WEU2 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc188F6WEU2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc188F6WEU2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc188F6WEU2 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ccdc188F6WEU2 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc188F6WEU2 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.53■□□□□ 0.4
Ccdc188F6WEU2 Gm29791-202ENSMUST00000207888 369 ntBASIC17.53■□□□□ 0.4
Ccdc188F6WEU2 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc188F6WEU2 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc188F6WEU2 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc188F6WEU2 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc188F6WEU2 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc188F6WEU2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc188F6WEU2 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc188F6WEU2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc188F6WEU2 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.52■□□□□ 0.4
Ccdc188F6WEU2 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc188F6WEU2 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.52■□□□□ 0.4
Ccdc188F6WEU2 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
Ccdc188F6WEU2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc188F6WEU2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.52■□□□□ 0.39
Ccdc188F6WEU2 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Ccdc188F6WEU2 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc188F6WEU2 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc188F6WEU2 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc188F6WEU2 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc188F6WEU2 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc188F6WEU2 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc188F6WEU2 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc188F6WEU2 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc188F6WEU2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ccdc188F6WEU2 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Ccdc188F6WEU2 Rprl3-201ENSMUST00000157400 290 ntBASIC17.51■□□□□ 0.39
Ccdc188F6WEU2 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc188F6WEU2 Chchd1-203ENSMUST00000224633 557 ntBASIC17.51■□□□□ 0.39
Ccdc188F6WEU2 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc188F6WEU2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Ccdc188F6WEU2 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc188F6WEU2 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc188F6WEU2 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc188F6WEU2 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc188F6WEU2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Ccdc188F6WEU2 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc188F6WEU2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc188F6WEU2 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc188F6WEU2 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Ccdc188F6WEU2 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.5■□□□□ 0.39
Ccdc188F6WEU2 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc188F6WEU2 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc188F6WEU2 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.5■□□□□ 0.39
Ccdc188F6WEU2 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Ccdc188F6WEU2 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ccdc188F6WEU2 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Ccdc188F6WEU2 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc188F6WEU2 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc188F6WEU2 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc188F6WEU2 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc188F6WEU2 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Ccdc188F6WEU2 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc188F6WEU2 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.49■□□□□ 0.39
Ccdc188F6WEU2 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc188F6WEU2 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc188F6WEU2 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc188F6WEU2 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc188F6WEU2 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Ccdc188F6WEU2 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Ccdc188F6WEU2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc188F6WEU2 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc188F6WEU2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Ccdc188F6WEU2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc188F6WEU2 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc188F6WEU2 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Ccdc188F6WEU2 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc188F6WEU2 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc188F6WEU2 Gm25990-201ENSMUST00000102440 86 ntBASIC17.48■□□□□ 0.39
Ccdc188F6WEU2 Gm13418-201ENSMUST00000119097 944 ntBASIC17.48■□□□□ 0.39
Ccdc188F6WEU2 Gm13312-201ENSMUST00000119631 718 ntBASIC17.48■□□□□ 0.39
Ccdc188F6WEU2 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc188F6WEU2 Gm7230-201ENSMUST00000173026 815 ntBASIC17.48■□□□□ 0.39
Ccdc188F6WEU2 Gm5745-201ENSMUST00000183748 313 ntBASIC17.48■□□□□ 0.39
Ccdc188F6WEU2 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.48■□□□□ 0.39
Ccdc188F6WEU2 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms