Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Col6a3E9PWQ3 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col6a3E9PWQ3 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col6a3E9PWQ3 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col6a3E9PWQ3 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col6a3E9PWQ3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Col6a3E9PWQ3 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC17.39■□□□□ 0.37
Col6a3E9PWQ3 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col6a3E9PWQ3 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.39■□□□□ 0.37
Col6a3E9PWQ3 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.39■□□□□ 0.37
Col6a3E9PWQ3 Gm13312-201ENSMUST00000119631 718 ntBASIC17.39■□□□□ 0.37
Col6a3E9PWQ3 H2-Pa-201ENSMUST00000182803 626 ntBASIC17.39■□□□□ 0.37
Col6a3E9PWQ3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col6a3E9PWQ3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col6a3E9PWQ3 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.39■□□□□ 0.37
Col6a3E9PWQ3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col6a3E9PWQ3 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col6a3E9PWQ3 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col6a3E9PWQ3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Col6a3E9PWQ3 Gm12428-201ENSMUST00000119844 727 ntBASIC17.38■□□□□ 0.37
Col6a3E9PWQ3 Rprl3-201ENSMUST00000157400 290 ntBASIC17.38■□□□□ 0.37
Col6a3E9PWQ3 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col6a3E9PWQ3 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Col6a3E9PWQ3 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col6a3E9PWQ3 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col6a3E9PWQ3 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col6a3E9PWQ3 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Col6a3E9PWQ3 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Col6a3E9PWQ3 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Col6a3E9PWQ3 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC17.38■□□□□ 0.37
Col6a3E9PWQ3 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col6a3E9PWQ3 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.38■□□□□ 0.37
Col6a3E9PWQ3 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col6a3E9PWQ3 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col6a3E9PWQ3 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.37■□□□□ 0.37
Col6a3E9PWQ3 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col6a3E9PWQ3 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.37■□□□□ 0.37
Col6a3E9PWQ3 Gm6550-201ENSMUST00000187574 993 ntBASIC17.37■□□□□ 0.37
Col6a3E9PWQ3 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Col6a3E9PWQ3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col6a3E9PWQ3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col6a3E9PWQ3 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col6a3E9PWQ3 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col6a3E9PWQ3 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col6a3E9PWQ3 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col6a3E9PWQ3 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col6a3E9PWQ3 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col6a3E9PWQ3 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.36■□□□□ 0.37
Col6a3E9PWQ3 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col6a3E9PWQ3 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col6a3E9PWQ3 Gm15222-202ENSMUST00000228667 1726 ntBASIC17.36■□□□□ 0.37
Col6a3E9PWQ3 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Col6a3E9PWQ3 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col6a3E9PWQ3 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col6a3E9PWQ3 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col6a3E9PWQ3 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Col6a3E9PWQ3 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.36■□□□□ 0.37
Col6a3E9PWQ3 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.36■□□□□ 0.37
Col6a3E9PWQ3 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col6a3E9PWQ3 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col6a3E9PWQ3 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col6a3E9PWQ3 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col6a3E9PWQ3 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col6a3E9PWQ3 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col6a3E9PWQ3 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Col6a3E9PWQ3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col6a3E9PWQ3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Col6a3E9PWQ3 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col6a3E9PWQ3 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC17.35■□□□□ 0.37
Col6a3E9PWQ3 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col6a3E9PWQ3 Gm11780-201ENSMUST00000136880 516 ntBASIC17.35■□□□□ 0.37
Col6a3E9PWQ3 Gm27628-201ENSMUST00000184911 107 ntBASIC17.35■□□□□ 0.37
Col6a3E9PWQ3 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col6a3E9PWQ3 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col6a3E9PWQ3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Col6a3E9PWQ3 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col6a3E9PWQ3 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col6a3E9PWQ3 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col6a3E9PWQ3 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col6a3E9PWQ3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col6a3E9PWQ3 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col6a3E9PWQ3 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col6a3E9PWQ3 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col6a3E9PWQ3 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col6a3E9PWQ3 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col6a3E9PWQ3 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC17.34■□□□□ 0.37
Col6a3E9PWQ3 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col6a3E9PWQ3 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Col6a3E9PWQ3 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col6a3E9PWQ3 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col6a3E9PWQ3 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col6a3E9PWQ3 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col6a3E9PWQ3 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Col6a3E9PWQ3 AV026068-213ENSMUST00000223675 1171 ntBASIC17.34■□□□□ 0.37
Col6a3E9PWQ3 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col6a3E9PWQ3 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col6a3E9PWQ3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.34■□□□□ 0.37
Col6a3E9PWQ3 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.33■□□□□ 0.37
Col6a3E9PWQ3 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col6a3E9PWQ3 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms