Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Gm45328-201ENSMUST00000210942 917 ntBASIC15.32■□□□□ 0.04
Dchs1E9PVD3 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Dchs1E9PVD3 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Dchs1E9PVD3 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Dchs1E9PVD3 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Dchs1E9PVD3 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Dchs1E9PVD3 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Dchs1E9PVD3 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
Dchs1E9PVD3 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Dchs1E9PVD3 Gm11594-201ENSMUST00000122313 162 ntBASIC15.32■□□□□ 0.04
Dchs1E9PVD3 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Dchs1E9PVD3 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dchs1E9PVD3 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dchs1E9PVD3 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dchs1E9PVD3 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Dchs1E9PVD3 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dchs1E9PVD3 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.31■□□□□ 0.04
Dchs1E9PVD3 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Dchs1E9PVD3 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.31■□□□□ 0.04
Dchs1E9PVD3 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Dchs1E9PVD3 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dchs1E9PVD3 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dchs1E9PVD3 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dchs1E9PVD3 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dchs1E9PVD3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dchs1E9PVD3 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dchs1E9PVD3 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dchs1E9PVD3 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Dchs1E9PVD3 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Dchs1E9PVD3 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dchs1E9PVD3 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Dchs1E9PVD3 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dchs1E9PVD3 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Dchs1E9PVD3 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dchs1E9PVD3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dchs1E9PVD3 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dchs1E9PVD3 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dchs1E9PVD3 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dchs1E9PVD3 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dchs1E9PVD3 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Dchs1E9PVD3 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Dchs1E9PVD3 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.3■□□□□ 0.04
Dchs1E9PVD3 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Dchs1E9PVD3 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Dchs1E9PVD3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dchs1E9PVD3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dchs1E9PVD3 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Dchs1E9PVD3 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dchs1E9PVD3 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Dchs1E9PVD3 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Dchs1E9PVD3 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dchs1E9PVD3 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Dchs1E9PVD3 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Dchs1E9PVD3 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.29■□□□□ 0.04
Dchs1E9PVD3 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dchs1E9PVD3 Gm13401-201ENSMUST00000117074 291 ntBASIC15.29■□□□□ 0.04
Dchs1E9PVD3 Gm11355-201ENSMUST00000121120 306 ntBASIC15.29■□□□□ 0.04
Dchs1E9PVD3 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.29■□□□□ 0.04
Dchs1E9PVD3 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Dchs1E9PVD3 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dchs1E9PVD3 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dchs1E9PVD3 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Dchs1E9PVD3 Mir770-201ENSMUST00000103252 94 ntBASIC15.29■□□□□ 0.04
Dchs1E9PVD3 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.29■□□□□ 0.04
Dchs1E9PVD3 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Dchs1E9PVD3 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.29■□□□□ 0.04
Dchs1E9PVD3 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.29■□□□□ 0.04
Dchs1E9PVD3 Gm5186-201ENSMUST00000218781 920 ntBASIC15.29■□□□□ 0.04
Dchs1E9PVD3 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Dchs1E9PVD3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.29■□□□□ 0.04
Dchs1E9PVD3 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Dchs1E9PVD3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Dchs1E9PVD3 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Dchs1E9PVD3 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Dchs1E9PVD3 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Dchs1E9PVD3 Gm11452-201ENSMUST00000122376 690 ntBASIC15.28■□□□□ 0.04
Dchs1E9PVD3 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.28■□□□□ 0.04
Dchs1E9PVD3 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Dchs1E9PVD3 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Dchs1E9PVD3 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Dchs1E9PVD3 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Dchs1E9PVD3 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Dchs1E9PVD3 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Dchs1E9PVD3 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Dchs1E9PVD3 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Dchs1E9PVD3 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Dchs1E9PVD3 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Dchs1E9PVD3 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Dchs1E9PVD3 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Dchs1E9PVD3 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.28■□□□□ 0.04
Dchs1E9PVD3 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Dchs1E9PVD3 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Dchs1E9PVD3 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Dchs1E9PVD3 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Dchs1E9PVD3 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Dchs1E9PVD3 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Dchs1E9PVD3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Dchs1E9PVD3 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.27■□□□□ 0.04
Dchs1E9PVD3 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Dchs1E9PVD3 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms