Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Shank1D3YZU1 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Shank1D3YZU1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Shank1D3YZU1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Shank1D3YZU1 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Shank1D3YZU1 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Shank1D3YZU1 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
Shank1D3YZU1 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Shank1D3YZU1 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
Shank1D3YZU1 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Shank1D3YZU1 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Shank1D3YZU1 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.46■□□□□ 0.07
Shank1D3YZU1 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Shank1D3YZU1 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Shank1D3YZU1 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Shank1D3YZU1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Shank1D3YZU1 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Shank1D3YZU1 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Shank1D3YZU1 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
Shank1D3YZU1 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Shank1D3YZU1 Gm26039-201ENSMUST00000158152 144 ntBASIC15.46■□□□□ 0.07
Shank1D3YZU1 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Shank1D3YZU1 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
Shank1D3YZU1 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.07
Shank1D3YZU1 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
Shank1D3YZU1 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Shank1D3YZU1 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Shank1D3YZU1 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Shank1D3YZU1 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Shank1D3YZU1 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Shank1D3YZU1 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.45■□□□□ 0.06
Shank1D3YZU1 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.45■□□□□ 0.06
Shank1D3YZU1 Gm27525-201ENSMUST00000184465 107 ntBASIC15.45■□□□□ 0.06
Shank1D3YZU1 Gm28659-201ENSMUST00000188013 759 ntBASIC15.45■□□□□ 0.06
Shank1D3YZU1 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Shank1D3YZU1 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Shank1D3YZU1 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Shank1D3YZU1 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Shank1D3YZU1 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Shank1D3YZU1 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Shank1D3YZU1 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.45■□□□□ 0.06
Shank1D3YZU1 Gm5864-201ENSMUST00000202263 970 ntBASIC15.45■□□□□ 0.06
Shank1D3YZU1 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Shank1D3YZU1 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Shank1D3YZU1 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
Shank1D3YZU1 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Shank1D3YZU1 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shank1D3YZU1 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shank1D3YZU1 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Shank1D3YZU1 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Shank1D3YZU1 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Shank1D3YZU1 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Shank1D3YZU1 Gm18733-201ENSMUST00000173950 856 ntBASIC15.44■□□□□ 0.06
Shank1D3YZU1 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Shank1D3YZU1 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Shank1D3YZU1 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shank1D3YZU1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shank1D3YZU1 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
Shank1D3YZU1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shank1D3YZU1 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shank1D3YZU1 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Shank1D3YZU1 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shank1D3YZU1 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC15.43■□□□□ 0.06
Shank1D3YZU1 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shank1D3YZU1 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shank1D3YZU1 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shank1D3YZU1 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shank1D3YZU1 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shank1D3YZU1 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shank1D3YZU1 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Shank1D3YZU1 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Shank1D3YZU1 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.43■□□□□ 0.06
Shank1D3YZU1 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shank1D3YZU1 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shank1D3YZU1 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shank1D3YZU1 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shank1D3YZU1 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shank1D3YZU1 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shank1D3YZU1 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Shank1D3YZU1 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Shank1D3YZU1 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Shank1D3YZU1 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Shank1D3YZU1 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.42■□□□□ 0.06
Shank1D3YZU1 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.42■□□□□ 0.06
Shank1D3YZU1 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shank1D3YZU1 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Shank1D3YZU1 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shank1D3YZU1 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shank1D3YZU1 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shank1D3YZU1 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shank1D3YZU1 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Shank1D3YZU1 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shank1D3YZU1 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Shank1D3YZU1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shank1D3YZU1 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Shank1D3YZU1 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.42■□□□□ 0.06
Shank1D3YZU1 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.42■□□□□ 0.06
Shank1D3YZU1 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
Shank1D3YZU1 Gm15794-201ENSMUST00000120182 631 ntBASIC15.42■□□□□ 0.06
Shank1D3YZU1 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms