Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx8D3YU81 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx8D3YU81 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.34■□□□□ 0.53
Rfx8D3YU81 Gm10517-202ENSMUST00000192970 758 ntBASIC18.34■□□□□ 0.53
Rfx8D3YU81 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Rfx8D3YU81 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx8D3YU81 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx8D3YU81 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.34■□□□□ 0.53
Rfx8D3YU81 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Rfx8D3YU81 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Rfx8D3YU81 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rfx8D3YU81 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx8D3YU81 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.34■□□□□ 0.53
Rfx8D3YU81 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx8D3YU81 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rfx8D3YU81 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Rfx8D3YU81 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rfx8D3YU81 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.33■□□□□ 0.53
Rfx8D3YU81 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rfx8D3YU81 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.33■□□□□ 0.53
Rfx8D3YU81 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rfx8D3YU81 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rfx8D3YU81 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Rfx8D3YU81 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rfx8D3YU81 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rfx8D3YU81 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.33■□□□□ 0.52
Rfx8D3YU81 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rfx8D3YU81 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Rfx8D3YU81 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rfx8D3YU81 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rfx8D3YU81 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.33■□□□□ 0.52
Rfx8D3YU81 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Rfx8D3YU81 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx8D3YU81 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx8D3YU81 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx8D3YU81 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.32■□□□□ 0.52
Rfx8D3YU81 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx8D3YU81 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx8D3YU81 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx8D3YU81 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Rfx8D3YU81 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx8D3YU81 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.32■□□□□ 0.52
Rfx8D3YU81 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.32■□□□□ 0.52
Rfx8D3YU81 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx8D3YU81 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx8D3YU81 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Rfx8D3YU81 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.32■□□□□ 0.52
Rfx8D3YU81 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx8D3YU81 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx8D3YU81 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx8D3YU81 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.32■□□□□ 0.52
Rfx8D3YU81 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.32■□□□□ 0.52
Rfx8D3YU81 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.32■□□□□ 0.52
Rfx8D3YU81 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Rfx8D3YU81 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx8D3YU81 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx8D3YU81 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx8D3YU81 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Rfx8D3YU81 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx8D3YU81 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Rfx8D3YU81 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx8D3YU81 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx8D3YU81 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx8D3YU81 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx8D3YU81 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Rfx8D3YU81 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx8D3YU81 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx8D3YU81 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
Rfx8D3YU81 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx8D3YU81 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx8D3YU81 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx8D3YU81 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx8D3YU81 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx8D3YU81 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.31■□□□□ 0.52
Rfx8D3YU81 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.31■□□□□ 0.52
Rfx8D3YU81 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx8D3YU81 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx8D3YU81 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx8D3YU81 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx8D3YU81 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx8D3YU81 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.31■□□□□ 0.52
Rfx8D3YU81 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx8D3YU81 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx8D3YU81 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx8D3YU81 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx8D3YU81 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx8D3YU81 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx8D3YU81 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx8D3YU81 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx8D3YU81 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx8D3YU81 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx8D3YU81 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.3■□□□□ 0.52
Rfx8D3YU81 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.3■□□□□ 0.52
Rfx8D3YU81 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.3■□□□□ 0.52
Rfx8D3YU81 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx8D3YU81 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx8D3YU81 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Rfx8D3YU81 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx8D3YU81 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx8D3YU81 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms