Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ptchd4B9EKX1 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ptchd4B9EKX1 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ptchd4B9EKX1 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.62■□□□□ 0.57
Ptchd4B9EKX1 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ptchd4B9EKX1 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ptchd4B9EKX1 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ptchd4B9EKX1 Grk6-206ENSMUST00000224995 2971 ntBASIC18.62■□□□□ 0.57
Ptchd4B9EKX1 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ptchd4B9EKX1 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Ptchd4B9EKX1 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ptchd4B9EKX1 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ptchd4B9EKX1 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Ptchd4B9EKX1 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Ptchd4B9EKX1 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Ptchd4B9EKX1 Gm9103-201ENSMUST00000119371 405 ntBASIC18.61■□□□□ 0.57
Ptchd4B9EKX1 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.61■□□□□ 0.57
Ptchd4B9EKX1 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.61■□□□□ 0.57
Ptchd4B9EKX1 Gm18958-201ENSMUST00000174258 762 ntBASIC18.61■□□□□ 0.57
Ptchd4B9EKX1 Gm27704-201ENSMUST00000185094 107 ntBASIC18.61■□□□□ 0.57
Ptchd4B9EKX1 Gm17808-201ENSMUST00000200859 894 ntBASIC18.61■□□□□ 0.57
Ptchd4B9EKX1 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.61■□□□□ 0.57
Ptchd4B9EKX1 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ptchd4B9EKX1 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ptchd4B9EKX1 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ptchd4B9EKX1 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ptchd4B9EKX1 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ptchd4B9EKX1 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ptchd4B9EKX1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ptchd4B9EKX1 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ptchd4B9EKX1 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ptchd4B9EKX1 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ptchd4B9EKX1 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Ptchd4B9EKX1 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ptchd4B9EKX1 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ptchd4B9EKX1 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.6■□□□□ 0.57
Ptchd4B9EKX1 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Ptchd4B9EKX1 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
Ptchd4B9EKX1 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.6■□□□□ 0.57
Ptchd4B9EKX1 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Ptchd4B9EKX1 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ptchd4B9EKX1 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ptchd4B9EKX1 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ptchd4B9EKX1 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Ptchd4B9EKX1 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ptchd4B9EKX1 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ptchd4B9EKX1 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ptchd4B9EKX1 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ptchd4B9EKX1 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ptchd4B9EKX1 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ptchd4B9EKX1 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.59■□□□□ 0.57
Ptchd4B9EKX1 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ptchd4B9EKX1 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Ptchd4B9EKX1 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ptchd4B9EKX1 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ptchd4B9EKX1 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ptchd4B9EKX1 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Ptchd4B9EKX1 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.59■□□□□ 0.57
Ptchd4B9EKX1 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ptchd4B9EKX1 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ptchd4B9EKX1 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ptchd4B9EKX1 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ptchd4B9EKX1 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ptchd4B9EKX1 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Ptchd4B9EKX1 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ptchd4B9EKX1 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ptchd4B9EKX1 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ptchd4B9EKX1 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ptchd4B9EKX1 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ptchd4B9EKX1 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ptchd4B9EKX1 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ptchd4B9EKX1 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ptchd4B9EKX1 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ptchd4B9EKX1 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Ptchd4B9EKX1 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ptchd4B9EKX1 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.58■□□□□ 0.56
Ptchd4B9EKX1 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ptchd4B9EKX1 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ptchd4B9EKX1 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ptchd4B9EKX1 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Ptchd4B9EKX1 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ptchd4B9EKX1 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ptchd4B9EKX1 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ptchd4B9EKX1 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ptchd4B9EKX1 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ptchd4B9EKX1 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ptchd4B9EKX1 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ptchd4B9EKX1 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Ptchd4B9EKX1 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ptchd4B9EKX1 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ptchd4B9EKX1 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ptchd4B9EKX1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ptchd4B9EKX1 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.56■□□□□ 0.56
Ptchd4B9EKX1 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ptchd4B9EKX1 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ptchd4B9EKX1 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ptchd4B9EKX1 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ptchd4B9EKX1 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ptchd4B9EKX1 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.56■□□□□ 0.56
Ptchd4B9EKX1 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 144.5 ms