Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a5A6H584 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Col6a5A6H584 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Col6a5A6H584 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Col6a5A6H584 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC13.08□□□□□ -0.32
Col6a5A6H584 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a5A6H584 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a5A6H584 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.08□□□□□ -0.32
Col6a5A6H584 Gm13036-201ENSMUST00000117799 748 ntBASIC13.08□□□□□ -0.32
Col6a5A6H584 Gm12260-201ENSMUST00000122447 411 ntBASIC13.08□□□□□ -0.32
Col6a5A6H584 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.08□□□□□ -0.32
Col6a5A6H584 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a5A6H584 AA543401-201ENSMUST00000164248 1269 ntBASIC13.08□□□□□ -0.32
Col6a5A6H584 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a5A6H584 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Col6a5A6H584 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.08□□□□□ -0.32
Col6a5A6H584 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Col6a5A6H584 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a5A6H584 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a5A6H584 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Col6a5A6H584 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a5A6H584 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a5A6H584 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a5A6H584 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a5A6H584 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Col6a5A6H584 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a5A6H584 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a5A6H584 Gm6550-201ENSMUST00000187574 993 ntBASIC13.08□□□□□ -0.32
Col6a5A6H584 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a5A6H584 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.08□□□□□ -0.32
Col6a5A6H584 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a5A6H584 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Col6a5A6H584 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Col6a5A6H584 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a5A6H584 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a5A6H584 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Col6a5A6H584 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.07□□□□□ -0.32
Col6a5A6H584 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a5A6H584 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Col6a5A6H584 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC13.07□□□□□ -0.32
Col6a5A6H584 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Col6a5A6H584 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a5A6H584 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.07□□□□□ -0.32
Col6a5A6H584 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a5A6H584 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.07□□□□□ -0.32
Col6a5A6H584 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Col6a5A6H584 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a5A6H584 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a5A6H584 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a5A6H584 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Col6a5A6H584 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a5A6H584 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC13.06□□□□□ -0.32
Col6a5A6H584 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a5A6H584 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Col6a5A6H584 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.06□□□□□ -0.32
Col6a5A6H584 Gm44872-201ENSMUST00000207864 420 ntBASIC13.06□□□□□ -0.32
Col6a5A6H584 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Col6a5A6H584 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.06□□□□□ -0.32
Col6a5A6H584 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.06□□□□□ -0.32
Col6a5A6H584 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a5A6H584 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a5A6H584 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Col6a5A6H584 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a5A6H584 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a5A6H584 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a5A6H584 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a5A6H584 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.06□□□□□ -0.32
Col6a5A6H584 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.06□□□□□ -0.32
Col6a5A6H584 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.06□□□□□ -0.32
Col6a5A6H584 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a5A6H584 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a5A6H584 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a5A6H584 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a5A6H584 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Col6a5A6H584 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Col6a5A6H584 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Col6a5A6H584 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Col6a5A6H584 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a5A6H584 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a5A6H584 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.05□□□□□ -0.32
Col6a5A6H584 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a5A6H584 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Col6a5A6H584 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.05□□□□□ -0.32
Col6a5A6H584 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.05□□□□□ -0.32
Col6a5A6H584 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.05□□□□□ -0.32
Col6a5A6H584 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Col6a5A6H584 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a5A6H584 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Col6a5A6H584 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a5A6H584 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a5A6H584 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a5A6H584 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a5A6H584 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a5A6H584 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a5A6H584 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.05□□□□□ -0.32
Col6a5A6H584 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Col6a5A6H584 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a5A6H584 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Col6a5A6H584 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.05□□□□□ -0.32
Col6a5A6H584 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms