Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv17A0A140T8P8 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv17A0A140T8P8 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.29□□□□□ -0.28
Trbv17A0A140T8P8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv17A0A140T8P8 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Trbv17A0A140T8P8 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv17A0A140T8P8 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv17A0A140T8P8 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv17A0A140T8P8 Gm10653-202ENSMUST00000139570 835 ntBASIC13.29□□□□□ -0.28
Trbv17A0A140T8P8 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv17A0A140T8P8 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv17A0A140T8P8 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv17A0A140T8P8 AC163280.1-201ENSMUST00000228194 1100 ntBASIC13.29□□□□□ -0.28
Trbv17A0A140T8P8 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC13.29□□□□□ -0.28
Trbv17A0A140T8P8 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv17A0A140T8P8 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv17A0A140T8P8 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trbv17A0A140T8P8 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv17A0A140T8P8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv17A0A140T8P8 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv17A0A140T8P8 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv17A0A140T8P8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trbv17A0A140T8P8 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv17A0A140T8P8 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv17A0A140T8P8 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv17A0A140T8P8 Alkbh1-212ENSMUST00000185301 408 ntBASIC13.28□□□□□ -0.28
Trbv17A0A140T8P8 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.28□□□□□ -0.28
Trbv17A0A140T8P8 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC13.28□□□□□ -0.28
Trbv17A0A140T8P8 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv17A0A140T8P8 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC13.28□□□□□ -0.28
Trbv17A0A140T8P8 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv17A0A140T8P8 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv17A0A140T8P8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv17A0A140T8P8 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Trbv17A0A140T8P8 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trbv17A0A140T8P8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trbv17A0A140T8P8 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trbv17A0A140T8P8 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trbv17A0A140T8P8 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trbv17A0A140T8P8 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trbv17A0A140T8P8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv17A0A140T8P8 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv17A0A140T8P8 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv17A0A140T8P8 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv17A0A140T8P8 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv17A0A140T8P8 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv17A0A140T8P8 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trbv17A0A140T8P8 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trbv17A0A140T8P8 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC13.27□□□□□ -0.29
Trbv17A0A140T8P8 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv17A0A140T8P8 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv17A0A140T8P8 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Trbv17A0A140T8P8 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Trbv17A0A140T8P8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv17A0A140T8P8 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC13.27□□□□□ -0.29
Trbv17A0A140T8P8 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv17A0A140T8P8 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC13.27□□□□□ -0.29
Trbv17A0A140T8P8 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv17A0A140T8P8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC13.27□□□□□ -0.29
Trbv17A0A140T8P8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC13.27□□□□□ -0.29
Trbv17A0A140T8P8 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv17A0A140T8P8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv17A0A140T8P8 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.26□□□□□ -0.29
Trbv17A0A140T8P8 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Trbv17A0A140T8P8 Gm15375-201ENSMUST00000119510 849 ntBASIC13.26□□□□□ -0.29
Trbv17A0A140T8P8 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Trbv17A0A140T8P8 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv17A0A140T8P8 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv17A0A140T8P8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv17A0A140T8P8 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv17A0A140T8P8 Gm20760-201ENSMUST00000179197 648 ntBASIC13.26□□□□□ -0.29
Trbv17A0A140T8P8 Gm29241-201ENSMUST00000189260 1096 ntBASIC13.26□□□□□ -0.29
Trbv17A0A140T8P8 Gm18666-201ENSMUST00000190039 958 ntBASIC13.26□□□□□ -0.29
Trbv17A0A140T8P8 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv17A0A140T8P8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv17A0A140T8P8 Nrn1-203ENSMUST00000223611 1443 ntBASIC13.26□□□□□ -0.29
Trbv17A0A140T8P8 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trbv17A0A140T8P8 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv17A0A140T8P8 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv17A0A140T8P8 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv17A0A140T8P8 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv17A0A140T8P8 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv17A0A140T8P8 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv17A0A140T8P8 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv17A0A140T8P8 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv17A0A140T8P8 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv17A0A140T8P8 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv17A0A140T8P8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv17A0A140T8P8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv17A0A140T8P8 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv17A0A140T8P8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trbv17A0A140T8P8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv17A0A140T8P8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv17A0A140T8P8 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv17A0A140T8P8 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv17A0A140T8P8 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv17A0A140T8P8 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv17A0A140T8P8 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC13.25□□□□□ -0.29
Trbv17A0A140T8P8 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv17A0A140T8P8 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms