Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc194A0A140LIT1 Mtag2-201ENSMUST00000058665 714 ntBASIC17.26■□□□□ 0.35
Ccdc194A0A140LIT1 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Ccdc194A0A140LIT1 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc194A0A140LIT1 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc194A0A140LIT1 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc194A0A140LIT1 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Ccdc194A0A140LIT1 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ccdc194A0A140LIT1 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc194A0A140LIT1 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc194A0A140LIT1 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc194A0A140LIT1 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc194A0A140LIT1 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc194A0A140LIT1 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ccdc194A0A140LIT1 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc194A0A140LIT1 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc194A0A140LIT1 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.25■□□□□ 0.35
Ccdc194A0A140LIT1 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc194A0A140LIT1 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.25■□□□□ 0.35
Ccdc194A0A140LIT1 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Ccdc194A0A140LIT1 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc194A0A140LIT1 Mir6349-201ENSMUST00000184059 97 ntBASIC17.25■□□□□ 0.35
Ccdc194A0A140LIT1 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.25■□□□□ 0.35
Ccdc194A0A140LIT1 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Ccdc194A0A140LIT1 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Ccdc194A0A140LIT1 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Ccdc194A0A140LIT1 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc194A0A140LIT1 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ccdc194A0A140LIT1 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc194A0A140LIT1 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ccdc194A0A140LIT1 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc194A0A140LIT1 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc194A0A140LIT1 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc194A0A140LIT1 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc194A0A140LIT1 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ccdc194A0A140LIT1 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Ccdc194A0A140LIT1 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc194A0A140LIT1 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc194A0A140LIT1 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.24■□□□□ 0.35
Ccdc194A0A140LIT1 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.24■□□□□ 0.35
Ccdc194A0A140LIT1 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc194A0A140LIT1 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc194A0A140LIT1 Gm10138-203ENSMUST00000206952 366 ntBASIC17.24■□□□□ 0.35
Ccdc194A0A140LIT1 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Ccdc194A0A140LIT1 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc194A0A140LIT1 Gm10602-201ENSMUST00000098239 609 ntBASIC17.24■□□□□ 0.35
Ccdc194A0A140LIT1 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ccdc194A0A140LIT1 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc194A0A140LIT1 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc194A0A140LIT1 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc194A0A140LIT1 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc194A0A140LIT1 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc194A0A140LIT1 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc194A0A140LIT1 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc194A0A140LIT1 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Ccdc194A0A140LIT1 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.23■□□□□ 0.35
Ccdc194A0A140LIT1 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc194A0A140LIT1 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc194A0A140LIT1 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc194A0A140LIT1 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc194A0A140LIT1 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc194A0A140LIT1 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc194A0A140LIT1 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.23■□□□□ 0.35
Ccdc194A0A140LIT1 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Ccdc194A0A140LIT1 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc194A0A140LIT1 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Ccdc194A0A140LIT1 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc194A0A140LIT1 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Ccdc194A0A140LIT1 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.22■□□□□ 0.35
Ccdc194A0A140LIT1 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc194A0A140LIT1 Gm13401-201ENSMUST00000117074 291 ntBASIC17.22■□□□□ 0.35
Ccdc194A0A140LIT1 Gm11643-201ENSMUST00000119578 864 ntBASIC17.22■□□□□ 0.35
Ccdc194A0A140LIT1 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc194A0A140LIT1 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc194A0A140LIT1 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc194A0A140LIT1 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Ccdc194A0A140LIT1 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc194A0A140LIT1 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc194A0A140LIT1 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc194A0A140LIT1 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc194A0A140LIT1 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc194A0A140LIT1 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc194A0A140LIT1 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc194A0A140LIT1 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc194A0A140LIT1 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc194A0A140LIT1 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc194A0A140LIT1 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc194A0A140LIT1 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc194A0A140LIT1 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc194A0A140LIT1 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc194A0A140LIT1 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.21■□□□□ 0.35
Ccdc194A0A140LIT1 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc194A0A140LIT1 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc194A0A140LIT1 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.21■□□□□ 0.35
Ccdc194A0A140LIT1 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc194A0A140LIT1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc194A0A140LIT1 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.21■□□□□ 0.35
Ccdc194A0A140LIT1 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.21■□□□□ 0.35
Ccdc194A0A140LIT1 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc194A0A140LIT1 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms