Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhgb8A0A140LI48 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhgb8A0A140LI48 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Pcdhgb8A0A140LI48 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhgb8A0A140LI48 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Pcdhgb8A0A140LI48 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhgb8A0A140LI48 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Pcdhgb8A0A140LI48 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhgb8A0A140LI48 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.66■□□□□ 0.1
Pcdhgb8A0A140LI48 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Pcdhgb8A0A140LI48 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.66■□□□□ 0.1
Pcdhgb8A0A140LI48 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhgb8A0A140LI48 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Pcdhgb8A0A140LI48 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhgb8A0A140LI48 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhgb8A0A140LI48 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Pcdhgb8A0A140LI48 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhgb8A0A140LI48 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Pcdhgb8A0A140LI48 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhgb8A0A140LI48 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Pcdhgb8A0A140LI48 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Pcdhgb8A0A140LI48 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhgb8A0A140LI48 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhgb8A0A140LI48 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhgb8A0A140LI48 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.65■□□□□ 0.1
Pcdhgb8A0A140LI48 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Pcdhgb8A0A140LI48 Trmt13-210ENSMUST00000198454 880 ntBASIC15.65■□□□□ 0.1
Pcdhgb8A0A140LI48 Gm2559-201ENSMUST00000201323 363 ntBASIC15.65■□□□□ 0.1
Pcdhgb8A0A140LI48 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC15.65■□□□□ 0.1
Pcdhgb8A0A140LI48 Gm44549-201ENSMUST00000208351 577 ntBASIC15.65■□□□□ 0.1
Pcdhgb8A0A140LI48 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.65■□□□□ 0.1
Pcdhgb8A0A140LI48 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Pcdhgb8A0A140LI48 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhgb8A0A140LI48 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhgb8A0A140LI48 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhgb8A0A140LI48 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Pcdhgb8A0A140LI48 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Pcdhgb8A0A140LI48 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhgb8A0A140LI48 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Pcdhgb8A0A140LI48 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhgb8A0A140LI48 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhgb8A0A140LI48 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhgb8A0A140LI48 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhgb8A0A140LI48 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhgb8A0A140LI48 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhgb8A0A140LI48 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhgb8A0A140LI48 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhgb8A0A140LI48 Gm13168-201ENSMUST00000121771 632 ntBASIC15.63■□□□□ 0.09
Pcdhgb8A0A140LI48 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.63■□□□□ 0.09
Pcdhgb8A0A140LI48 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.63■□□□□ 0.09
Pcdhgb8A0A140LI48 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhgb8A0A140LI48 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhgb8A0A140LI48 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhgb8A0A140LI48 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.63■□□□□ 0.09
Pcdhgb8A0A140LI48 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.62■□□□□ 0.09
Pcdhgb8A0A140LI48 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhgb8A0A140LI48 Dancr-204ENSMUST00000132389 2347 ntBASIC15.62■□□□□ 0.09
Pcdhgb8A0A140LI48 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhgb8A0A140LI48 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhgb8A0A140LI48 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhgb8A0A140LI48 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Pcdhgb8A0A140LI48 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhgb8A0A140LI48 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhgb8A0A140LI48 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.62■□□□□ 0.09
Pcdhgb8A0A140LI48 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhgb8A0A140LI48 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhgb8A0A140LI48 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhgb8A0A140LI48 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhgb8A0A140LI48 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhgb8A0A140LI48 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhgb8A0A140LI48 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhgb8A0A140LI48 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhgb8A0A140LI48 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhgb8A0A140LI48 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhgb8A0A140LI48 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhgb8A0A140LI48 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhgb8A0A140LI48 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhgb8A0A140LI48 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhgb8A0A140LI48 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhgb8A0A140LI48 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhgb8A0A140LI48 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhgb8A0A140LI48 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhgb8A0A140LI48 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhgb8A0A140LI48 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhgb8A0A140LI48 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhgb8A0A140LI48 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Pcdhgb8A0A140LI48 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Pcdhgb8A0A140LI48 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Pcdhgb8A0A140LI48 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhgb8A0A140LI48 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
Pcdhgb8A0A140LI48 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhgb8A0A140LI48 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Pcdhgb8A0A140LI48 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhgb8A0A140LI48 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhgb8A0A140LI48 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhgb8A0A140LI48 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Pcdhgb8A0A140LI48 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhgb8A0A140LI48 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhgb8A0A140LI48 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhgb8A0A140LI48 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms