Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv29A0A0G2LB96 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trbv29A0A0G2LB96 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv29A0A0G2LB96 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.41□□□□□ -0.1
Trbv29A0A0G2LB96 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.41□□□□□ -0.1
Trbv29A0A0G2LB96 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv29A0A0G2LB96 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trbv29A0A0G2LB96 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv29A0A0G2LB96 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv29A0A0G2LB96 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv29A0A0G2LB96 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv29A0A0G2LB96 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv29A0A0G2LB96 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv29A0A0G2LB96 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trbv29A0A0G2LB96 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trbv29A0A0G2LB96 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv29A0A0G2LB96 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv29A0A0G2LB96 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv29A0A0G2LB96 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trbv29A0A0G2LB96 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv29A0A0G2LB96 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv29A0A0G2LB96 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv29A0A0G2LB96 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv29A0A0G2LB96 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv29A0A0G2LB96 Gm13401-201ENSMUST00000117074 291 ntBASIC14.4□□□□□ -0.1
Trbv29A0A0G2LB96 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Trbv29A0A0G2LB96 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Trbv29A0A0G2LB96 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv29A0A0G2LB96 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv29A0A0G2LB96 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv29A0A0G2LB96 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Trbv29A0A0G2LB96 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trbv29A0A0G2LB96 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv29A0A0G2LB96 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv29A0A0G2LB96 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv29A0A0G2LB96 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trbv29A0A0G2LB96 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trbv29A0A0G2LB96 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv29A0A0G2LB96 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv29A0A0G2LB96 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv29A0A0G2LB96 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trbv29A0A0G2LB96 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv29A0A0G2LB96 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trbv29A0A0G2LB96 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trbv29A0A0G2LB96 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv29A0A0G2LB96 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv29A0A0G2LB96 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trbv29A0A0G2LB96 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC14.39□□□□□ -0.11
Trbv29A0A0G2LB96 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv29A0A0G2LB96 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trbv29A0A0G2LB96 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv29A0A0G2LB96 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv29A0A0G2LB96 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv29A0A0G2LB96 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv29A0A0G2LB96 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv29A0A0G2LB96 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv29A0A0G2LB96 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv29A0A0G2LB96 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trbv29A0A0G2LB96 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv29A0A0G2LB96 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv29A0A0G2LB96 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.38□□□□□ -0.11
Trbv29A0A0G2LB96 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv29A0A0G2LB96 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trbv29A0A0G2LB96 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv29A0A0G2LB96 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.38□□□□□ -0.11
Trbv29A0A0G2LB96 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv29A0A0G2LB96 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv29A0A0G2LB96 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv29A0A0G2LB96 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.38□□□□□ -0.11
Trbv29A0A0G2LB96 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv29A0A0G2LB96 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv29A0A0G2LB96 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv29A0A0G2LB96 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv29A0A0G2LB96 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv29A0A0G2LB96 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.37□□□□□ -0.11
Trbv29A0A0G2LB96 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv29A0A0G2LB96 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv29A0A0G2LB96 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.37□□□□□ -0.11
Trbv29A0A0G2LB96 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trbv29A0A0G2LB96 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv29A0A0G2LB96 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv29A0A0G2LB96 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv29A0A0G2LB96 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC14.37□□□□□ -0.11
Trbv29A0A0G2LB96 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trbv29A0A0G2LB96 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.37□□□□□ -0.11
Trbv29A0A0G2LB96 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trbv29A0A0G2LB96 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv29A0A0G2LB96 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv29A0A0G2LB96 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv29A0A0G2LB96 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv29A0A0G2LB96 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv29A0A0G2LB96 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv29A0A0G2LB96 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv29A0A0G2LB96 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv29A0A0G2LB96 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv29A0A0G2LB96 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv29A0A0G2LB96 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv29A0A0G2LB96 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv29A0A0G2LB96 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.36□□□□□ -0.11
Trbv29A0A0G2LB96 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms