Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-2A0A0G2JF93 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trav13n-2A0A0G2JF93 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-2A0A0G2JF93 AC165080.2-201ENSMUST00000217491 1530 ntBASIC11.51□□□□□ -0.57
Trav13n-2A0A0G2JF93 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-2A0A0G2JF93 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-2A0A0G2JF93 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav13n-2A0A0G2JF93 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-2A0A0G2JF93 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-2A0A0G2JF93 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-2A0A0G2JF93 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC11.51□□□□□ -0.57
Trav13n-2A0A0G2JF93 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC11.51□□□□□ -0.57
Trav13n-2A0A0G2JF93 Gm27032-201ENSMUST00000183124 1116 ntBASIC11.51□□□□□ -0.57
Trav13n-2A0A0G2JF93 Spcs1-204ENSMUST00000226782 949 ntBASIC11.51□□□□□ -0.57
Trav13n-2A0A0G2JF93 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-2A0A0G2JF93 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-2A0A0G2JF93 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-2A0A0G2JF93 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-2A0A0G2JF93 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-2A0A0G2JF93 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-2A0A0G2JF93 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-2A0A0G2JF93 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-2A0A0G2JF93 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-2A0A0G2JF93 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-2A0A0G2JF93 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-2A0A0G2JF93 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-2A0A0G2JF93 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trav13n-2A0A0G2JF93 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-2A0A0G2JF93 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-2A0A0G2JF93 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trav13n-2A0A0G2JF93 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Trav13n-2A0A0G2JF93 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13n-2A0A0G2JF93 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13n-2A0A0G2JF93 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13n-2A0A0G2JF93 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav13n-2A0A0G2JF93 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13n-2A0A0G2JF93 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13n-2A0A0G2JF93 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13n-2A0A0G2JF93 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13n-2A0A0G2JF93 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13n-2A0A0G2JF93 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC11.5□□□□□ -0.57
Trav13n-2A0A0G2JF93 AC137127.1-201ENSMUST00000213466 1078 ntBASIC11.5□□□□□ -0.57
Trav13n-2A0A0G2JF93 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC11.5□□□□□ -0.57
Trav13n-2A0A0G2JF93 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13n-2A0A0G2JF93 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav13n-2A0A0G2JF93 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13n-2A0A0G2JF93 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13n-2A0A0G2JF93 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Trav13n-2A0A0G2JF93 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13n-2A0A0G2JF93 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13n-2A0A0G2JF93 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13n-2A0A0G2JF93 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13n-2A0A0G2JF93 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13n-2A0A0G2JF93 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav13n-2A0A0G2JF93 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-2A0A0G2JF93 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-2A0A0G2JF93 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-2A0A0G2JF93 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Trav13n-2A0A0G2JF93 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-2A0A0G2JF93 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC11.49□□□□□ -0.57
Trav13n-2A0A0G2JF93 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-2A0A0G2JF93 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-2A0A0G2JF93 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-2A0A0G2JF93 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-2A0A0G2JF93 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC11.49□□□□□ -0.57
Trav13n-2A0A0G2JF93 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav13n-2A0A0G2JF93 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-2A0A0G2JF93 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-2A0A0G2JF93 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC11.49□□□□□ -0.57
Trav13n-2A0A0G2JF93 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-2A0A0G2JF93 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-2A0A0G2JF93 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-2A0A0G2JF93 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-2A0A0G2JF93 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-2A0A0G2JF93 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-2A0A0G2JF93 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-2A0A0G2JF93 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-2A0A0G2JF93 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-2A0A0G2JF93 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trav13n-2A0A0G2JF93 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-2A0A0G2JF93 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav13n-2A0A0G2JF93 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-2A0A0G2JF93 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-2A0A0G2JF93 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-2A0A0G2JF93 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-2A0A0G2JF93 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-2A0A0G2JF93 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-2A0A0G2JF93 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav13n-2A0A0G2JF93 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-2A0A0G2JF93 Golgb1-201ENSMUST00000023534 498 ntBASIC11.48□□□□□ -0.57
Trav13n-2A0A0G2JF93 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-2A0A0G2JF93 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-2A0A0G2JF93 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav13n-2A0A0G2JF93 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-2A0A0G2JF93 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-2A0A0G2JF93 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-2A0A0G2JF93 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-2A0A0G2JF93 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-2A0A0G2JF93 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-2A0A0G2JF93 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms