Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9n-2A0A0G2JDP3 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Mir6349-201ENSMUST00000184059 97 ntBASIC12.61□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Trmt13-210ENSMUST00000198454 880 ntBASIC12.61□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC12.61□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9n-2A0A0G2JDP3 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC12.6□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Gm10654-201ENSMUST00000098653 1633 ntBASIC12.6□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Gm13401-201ENSMUST00000117074 291 ntBASIC12.6□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
Trav9n-2A0A0G2JDP3 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav9n-2A0A0G2JDP3 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC12.58□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav9n-2A0A0G2JDP3 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav9n-2A0A0G2JDP3 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC12.58□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Gm12527-201ENSMUST00000117967 564 ntBASIC12.58□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-2A0A0G2JDP3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms