Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav19A0A0B4J1K4 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav19A0A0B4J1K4 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Trav19A0A0B4J1K4 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC12.98□□□□□ -0.33
Trav19A0A0B4J1K4 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav19A0A0B4J1K4 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav19A0A0B4J1K4 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav19A0A0B4J1K4 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav19A0A0B4J1K4 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Trav19A0A0B4J1K4 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav19A0A0B4J1K4 Gm16401-202ENSMUST00000197463 2074 ntBASIC12.98□□□□□ -0.33
Trav19A0A0B4J1K4 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav19A0A0B4J1K4 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav19A0A0B4J1K4 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav19A0A0B4J1K4 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav19A0A0B4J1K4 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav19A0A0B4J1K4 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav19A0A0B4J1K4 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav19A0A0B4J1K4 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav19A0A0B4J1K4 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav19A0A0B4J1K4 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav19A0A0B4J1K4 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav19A0A0B4J1K4 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Trav19A0A0B4J1K4 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav19A0A0B4J1K4 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav19A0A0B4J1K4 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav19A0A0B4J1K4 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav19A0A0B4J1K4 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav19A0A0B4J1K4 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav19A0A0B4J1K4 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC12.97□□□□□ -0.33
Trav19A0A0B4J1K4 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav19A0A0B4J1K4 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav19A0A0B4J1K4 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav19A0A0B4J1K4 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav19A0A0B4J1K4 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Trav19A0A0B4J1K4 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav19A0A0B4J1K4 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav19A0A0B4J1K4 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Trav19A0A0B4J1K4 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav19A0A0B4J1K4 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav19A0A0B4J1K4 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav19A0A0B4J1K4 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav19A0A0B4J1K4 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav19A0A0B4J1K4 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav19A0A0B4J1K4 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav19A0A0B4J1K4 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav19A0A0B4J1K4 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav19A0A0B4J1K4 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav19A0A0B4J1K4 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trav19A0A0B4J1K4 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav19A0A0B4J1K4 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav19A0A0B4J1K4 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav19A0A0B4J1K4 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav19A0A0B4J1K4 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav19A0A0B4J1K4 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Trav19A0A0B4J1K4 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav19A0A0B4J1K4 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trav19A0A0B4J1K4 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav19A0A0B4J1K4 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav19A0A0B4J1K4 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav19A0A0B4J1K4 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav19A0A0B4J1K4 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC12.96□□□□□ -0.33
Trav19A0A0B4J1K4 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav19A0A0B4J1K4 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trav19A0A0B4J1K4 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav19A0A0B4J1K4 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Trav19A0A0B4J1K4 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC12.96□□□□□ -0.33
Trav19A0A0B4J1K4 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC12.96□□□□□ -0.33
Trav19A0A0B4J1K4 Gm7514-201ENSMUST00000209475 934 ntBASIC12.96□□□□□ -0.33
Trav19A0A0B4J1K4 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav19A0A0B4J1K4 Ap3s1-204ENSMUST00000225520 957 ntBASIC12.96□□□□□ -0.33
Trav19A0A0B4J1K4 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trav19A0A0B4J1K4 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav19A0A0B4J1K4 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav19A0A0B4J1K4 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav19A0A0B4J1K4 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav19A0A0B4J1K4 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav19A0A0B4J1K4 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav19A0A0B4J1K4 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav19A0A0B4J1K4 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav19A0A0B4J1K4 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav19A0A0B4J1K4 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav19A0A0B4J1K4 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav19A0A0B4J1K4 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav19A0A0B4J1K4 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav19A0A0B4J1K4 Gm45774-201ENSMUST00000211992 2665 ntBASIC12.95□□□□□ -0.34
Trav19A0A0B4J1K4 Mir8112-201ENSMUST00000184382 131 ntBASIC12.95□□□□□ -0.34
Trav19A0A0B4J1K4 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav19A0A0B4J1K4 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav19A0A0B4J1K4 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav19A0A0B4J1K4 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav19A0A0B4J1K4 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav19A0A0B4J1K4 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav19A0A0B4J1K4 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav19A0A0B4J1K4 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav19A0A0B4J1K4 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav19A0A0B4J1K4 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav19A0A0B4J1K4 Haglr-201ENSMUST00000100000 2085 ntBASIC12.95□□□□□ -0.34
Trav19A0A0B4J1K4 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav19A0A0B4J1K4 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms