Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-47A0A0A6YY41 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-47A0A0A6YY41 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-47A0A0A6YY41 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-47A0A0A6YY41 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-47A0A0A6YY41 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-47A0A0A6YY41 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-47A0A0A6YY41 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-47A0A0A6YY41 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-47A0A0A6YY41 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-47A0A0A6YY41 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Ighv1-47A0A0A6YY41 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-47A0A0A6YY41 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.31□□□□□ -0.12
Ighv1-47A0A0A6YY41 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ighv1-47A0A0A6YY41 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-47A0A0A6YY41 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ighv1-47A0A0A6YY41 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-47A0A0A6YY41 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ighv1-47A0A0A6YY41 Gm12896-201ENSMUST00000118430 226 ntBASIC14.31□□□□□ -0.12
Ighv1-47A0A0A6YY41 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Ighv1-47A0A0A6YY41 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ighv1-47A0A0A6YY41 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14.31□□□□□ -0.12
Ighv1-47A0A0A6YY41 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC14.31□□□□□ -0.12
Ighv1-47A0A0A6YY41 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-47A0A0A6YY41 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-47A0A0A6YY41 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-47A0A0A6YY41 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.31□□□□□ -0.12
Ighv1-47A0A0A6YY41 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-47A0A0A6YY41 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-47A0A0A6YY41 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.31□□□□□ -0.12
Ighv1-47A0A0A6YY41 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-47A0A0A6YY41 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-47A0A0A6YY41 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-47A0A0A6YY41 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-47A0A0A6YY41 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv1-47A0A0A6YY41 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv1-47A0A0A6YY41 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ighv1-47A0A0A6YY41 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv1-47A0A0A6YY41 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv1-47A0A0A6YY41 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ighv1-47A0A0A6YY41 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.3□□□□□ -0.12
Ighv1-47A0A0A6YY41 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv1-47A0A0A6YY41 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv1-47A0A0A6YY41 Gm13216-201ENSMUST00000117145 591 ntBASIC14.3□□□□□ -0.12
Ighv1-47A0A0A6YY41 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC14.3□□□□□ -0.12
Ighv1-47A0A0A6YY41 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC14.3□□□□□ -0.12
Ighv1-47A0A0A6YY41 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv1-47A0A0A6YY41 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv1-47A0A0A6YY41 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv1-47A0A0A6YY41 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv1-47A0A0A6YY41 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Ighv1-47A0A0A6YY41 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv1-47A0A0A6YY41 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv1-47A0A0A6YY41 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.3□□□□□ -0.12
Ighv1-47A0A0A6YY41 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv1-47A0A0A6YY41 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv1-47A0A0A6YY41 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Ighv1-47A0A0A6YY41 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ighv1-47A0A0A6YY41 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ighv1-47A0A0A6YY41 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ighv1-47A0A0A6YY41 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Ighv1-47A0A0A6YY41 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ighv1-47A0A0A6YY41 Gm10418-201ENSMUST00000100943 576 ntBASIC14.29□□□□□ -0.12
Ighv1-47A0A0A6YY41 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ighv1-47A0A0A6YY41 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ighv1-47A0A0A6YY41 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC14.29□□□□□ -0.12
Ighv1-47A0A0A6YY41 Gm21596-201ENSMUST00000178049 1316 ntBASIC14.29□□□□□ -0.12
Ighv1-47A0A0A6YY41 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ighv1-47A0A0A6YY41 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ighv1-47A0A0A6YY41 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ighv1-47A0A0A6YY41 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Ighv1-47A0A0A6YY41 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-47A0A0A6YY41 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-47A0A0A6YY41 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-47A0A0A6YY41 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-47A0A0A6YY41 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-47A0A0A6YY41 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.28□□□□□ -0.12
Ighv1-47A0A0A6YY41 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-47A0A0A6YY41 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-47A0A0A6YY41 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-47A0A0A6YY41 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-47A0A0A6YY41 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-47A0A0A6YY41 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-47A0A0A6YY41 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-47A0A0A6YY41 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-47A0A0A6YY41 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-47A0A0A6YY41 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-47A0A0A6YY41 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-47A0A0A6YY41 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-47A0A0A6YY41 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ighv1-47A0A0A6YY41 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-47A0A0A6YY41 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-47A0A0A6YY41 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-47A0A0A6YY41 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ighv1-47A0A0A6YY41 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.27□□□□□ -0.12
Ighv1-47A0A0A6YY41 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ighv1-47A0A0A6YY41 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.27□□□□□ -0.12
Ighv1-47A0A0A6YY41 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.27□□□□□ -0.13
Ighv1-47A0A0A6YY41 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-47A0A0A6YY41 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms