Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 Mir3081-201ENSMUST00000175305 84 ntBASIC14.37□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Actl10-202ENSMUST00000226583 1501 ntBASIC14.36□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC14.36□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.36□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Gm37722-201ENSMUST00000193757 208 ntBASIC14.36□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.36□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Mir770-201ENSMUST00000103252 94 ntBASIC14.35□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.35□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Gm27742-201ENSMUST00000184667 60 ntBASIC14.35□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.35□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC14.35□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv3-4A0A0A6YXF1 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.34□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Gm27357-201ENSMUST00000183754 135 ntBASIC14.34□□□□□ -0.11
Ighv3-4A0A0A6YXF1 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.34□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.34□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ighv3-4A0A0A6YXF1 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ighv3-4A0A0A6YXF1 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Ighv3-4A0A0A6YXF1 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.33□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.33□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.33□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Gm45328-201ENSMUST00000210942 917 ntBASIC14.33□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ighv3-4A0A0A6YXF1 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms