Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbc1A0A0A6YWV4 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.9■□□□□ 0.14
Trbc1A0A0A6YWV4 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.9■□□□□ 0.14
Trbc1A0A0A6YWV4 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.9■□□□□ 0.14
Trbc1A0A0A6YWV4 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.9■□□□□ 0.14
Trbc1A0A0A6YWV4 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbc1A0A0A6YWV4 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbc1A0A0A6YWV4 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbc1A0A0A6YWV4 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Trbc1A0A0A6YWV4 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbc1A0A0A6YWV4 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trbc1A0A0A6YWV4 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbc1A0A0A6YWV4 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbc1A0A0A6YWV4 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trbc1A0A0A6YWV4 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbc1A0A0A6YWV4 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbc1A0A0A6YWV4 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbc1A0A0A6YWV4 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbc1A0A0A6YWV4 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbc1A0A0A6YWV4 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbc1A0A0A6YWV4 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbc1A0A0A6YWV4 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbc1A0A0A6YWV4 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trbc1A0A0A6YWV4 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Trbc1A0A0A6YWV4 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbc1A0A0A6YWV4 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbc1A0A0A6YWV4 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbc1A0A0A6YWV4 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trbc1A0A0A6YWV4 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trbc1A0A0A6YWV4 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trbc1A0A0A6YWV4 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbc1A0A0A6YWV4 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbc1A0A0A6YWV4 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trbc1A0A0A6YWV4 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbc1A0A0A6YWV4 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.89■□□□□ 0.13
Trbc1A0A0A6YWV4 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.89■□□□□ 0.13
Trbc1A0A0A6YWV4 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.89■□□□□ 0.13
Trbc1A0A0A6YWV4 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbc1A0A0A6YWV4 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trbc1A0A0A6YWV4 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trbc1A0A0A6YWV4 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbc1A0A0A6YWV4 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbc1A0A0A6YWV4 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Trbc1A0A0A6YWV4 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbc1A0A0A6YWV4 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbc1A0A0A6YWV4 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbc1A0A0A6YWV4 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trbc1A0A0A6YWV4 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbc1A0A0A6YWV4 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trbc1A0A0A6YWV4 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbc1A0A0A6YWV4 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbc1A0A0A6YWV4 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbc1A0A0A6YWV4 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbc1A0A0A6YWV4 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trbc1A0A0A6YWV4 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbc1A0A0A6YWV4 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbc1A0A0A6YWV4 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbc1A0A0A6YWV4 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trbc1A0A0A6YWV4 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbc1A0A0A6YWV4 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbc1A0A0A6YWV4 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbc1A0A0A6YWV4 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trbc1A0A0A6YWV4 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.88■□□□□ 0.13
Trbc1A0A0A6YWV4 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trbc1A0A0A6YWV4 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
Trbc1A0A0A6YWV4 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.88■□□□□ 0.13
Trbc1A0A0A6YWV4 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.88■□□□□ 0.13
Trbc1A0A0A6YWV4 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbc1A0A0A6YWV4 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbc1A0A0A6YWV4 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trbc1A0A0A6YWV4 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Trbc1A0A0A6YWV4 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbc1A0A0A6YWV4 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbc1A0A0A6YWV4 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbc1A0A0A6YWV4 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbc1A0A0A6YWV4 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbc1A0A0A6YWV4 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.88■□□□□ 0.13
Trbc1A0A0A6YWV4 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Trbc1A0A0A6YWV4 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbc1A0A0A6YWV4 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.87■□□□□ 0.13
Trbc1A0A0A6YWV4 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.87■□□□□ 0.13
Trbc1A0A0A6YWV4 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Trbc1A0A0A6YWV4 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Trbc1A0A0A6YWV4 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbc1A0A0A6YWV4 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbc1A0A0A6YWV4 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbc1A0A0A6YWV4 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbc1A0A0A6YWV4 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trbc1A0A0A6YWV4 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbc1A0A0A6YWV4 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbc1A0A0A6YWV4 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbc1A0A0A6YWV4 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbc1A0A0A6YWV4 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbc1A0A0A6YWV4 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.86■□□□□ 0.13
Trbc1A0A0A6YWV4 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.86■□□□□ 0.13
Trbc1A0A0A6YWV4 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trbc1A0A0A6YWV4 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbc1A0A0A6YWV4 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trbc1A0A0A6YWV4 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbc1A0A0A6YWV4 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms