Protein–RNA interactions for Protein: A0A0A6YWL2

Ighv3-3, Immunoglobulin heavy variable V3-3 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-3A0A0A6YWL2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC12.72□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Gm19721-201ENSMUST00000195284 1764 ntBASIC12.71□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Gm10654-201ENSMUST00000098653 1633 ntBASIC12.71□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC12.71□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC12.71□□□□□ -0.37
Ighv3-3A0A0A6YWL2 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ighv3-3A0A0A6YWL2 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ighv3-3A0A0A6YWL2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ighv3-3A0A0A6YWL2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ighv3-3A0A0A6YWL2 CT025689.6-201ENSMUST00000224991 1104 ntBASIC12.7□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ighv3-3A0A0A6YWL2 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC12.69□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC12.69□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC12.69□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Gm5408-201ENSMUST00000197998 747 ntBASIC12.69□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Mtag2-201ENSMUST00000058665 714 ntBASIC12.69□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC12.68□□□□□ -0.38
Ighv3-3A0A0A6YWL2 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC12.68□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC12.68□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Ighv3-3A0A0A6YWL2 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ighv3-3A0A0A6YWL2 AC122769.4-201ENSMUST00000228166 901 ntBASIC12.68□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ighv3-3A0A0A6YWL2 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms