Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6d-7A0A075B6B0 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Trav6d-7A0A075B6B0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6d-7A0A075B6B0 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6d-7A0A075B6B0 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6d-7A0A075B6B0 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6d-7A0A075B6B0 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Trav6d-7A0A075B6B0 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-7A0A075B6B0 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-7A0A075B6B0 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-7A0A075B6B0 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-7A0A075B6B0 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-7A0A075B6B0 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-7A0A075B6B0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-7A0A075B6B0 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-7A0A075B6B0 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-7A0A075B6B0 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-7A0A075B6B0 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-7A0A075B6B0 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-7A0A075B6B0 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-7A0A075B6B0 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-7A0A075B6B0 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-7A0A075B6B0 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-7A0A075B6B0 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-7A0A075B6B0 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-7A0A075B6B0 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-7A0A075B6B0 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-7A0A075B6B0 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav6d-7A0A075B6B0 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-7A0A075B6B0 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-7A0A075B6B0 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Trav6d-7A0A075B6B0 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-7A0A075B6B0 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trav6d-7A0A075B6B0 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-7A0A075B6B0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav6d-7A0A075B6B0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-7A0A075B6B0 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC13.39□□□□□ -0.27
Trav6d-7A0A075B6B0 Gm44549-201ENSMUST00000208351 577 ntBASIC13.39□□□□□ -0.27
Trav6d-7A0A075B6B0 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav6d-7A0A075B6B0 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav6d-7A0A075B6B0 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-7A0A075B6B0 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-7A0A075B6B0 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-7A0A075B6B0 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav6d-7A0A075B6B0 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav6d-7A0A075B6B0 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-7A0A075B6B0 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-7A0A075B6B0 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav6d-7A0A075B6B0 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-7A0A075B6B0 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trav6d-7A0A075B6B0 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-7A0A075B6B0 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trav6d-7A0A075B6B0 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-7A0A075B6B0 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-7A0A075B6B0 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav6d-7A0A075B6B0 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-7A0A075B6B0 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-7A0A075B6B0 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.38□□□□□ -0.27
Trav6d-7A0A075B6B0 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Trav6d-7A0A075B6B0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC13.38□□□□□ -0.27
Trav6d-7A0A075B6B0 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-7A0A075B6B0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav6d-7A0A075B6B0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-7A0A075B6B0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-7A0A075B6B0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trav6d-7A0A075B6B0 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-7A0A075B6B0 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-7A0A075B6B0 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-7A0A075B6B0 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC13.38□□□□□ -0.27
Trav6d-7A0A075B6B0 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-7A0A075B6B0 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav6d-7A0A075B6B0 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-7A0A075B6B0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav6d-7A0A075B6B0 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-7A0A075B6B0 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-7A0A075B6B0 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-7A0A075B6B0 Idnk-204ENSMUST00000226010 1898 ntBASIC13.38□□□□□ -0.27
Trav6d-7A0A075B6B0 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-7A0A075B6B0 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-7A0A075B6B0 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-7A0A075B6B0 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-7A0A075B6B0 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-7A0A075B6B0 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav6d-7A0A075B6B0 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-7A0A075B6B0 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-7A0A075B6B0 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-7A0A075B6B0 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Trav6d-7A0A075B6B0 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav6d-7A0A075B6B0 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-7A0A075B6B0 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-7A0A075B6B0 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-7A0A075B6B0 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-7A0A075B6B0 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-7A0A075B6B0 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-7A0A075B6B0 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav6d-7A0A075B6B0 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav6d-7A0A075B6B0 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-7A0A075B6B0 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6d-7A0A075B6B0 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
Trav6d-7A0A075B6B0 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms