Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6n-7A0A075B6A6 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6n-7A0A075B6A6 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.71□□□□□ -0.05
Trav6n-7A0A075B6A6 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
Trav6n-7A0A075B6A6 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6n-7A0A075B6A6 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6n-7A0A075B6A6 Gm24841-201ENSMUST00000158676 357 ntBASIC14.71□□□□□ -0.05
Trav6n-7A0A075B6A6 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6n-7A0A075B6A6 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav6n-7A0A075B6A6 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6n-7A0A075B6A6 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6n-7A0A075B6A6 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6n-7A0A075B6A6 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trav6n-7A0A075B6A6 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav6n-7A0A075B6A6 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6n-7A0A075B6A6 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6n-7A0A075B6A6 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6n-7A0A075B6A6 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav6n-7A0A075B6A6 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav6n-7A0A075B6A6 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav6n-7A0A075B6A6 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav6n-7A0A075B6A6 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6n-7A0A075B6A6 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.7□□□□□ -0.06
Trav6n-7A0A075B6A6 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6n-7A0A075B6A6 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6n-7A0A075B6A6 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6n-7A0A075B6A6 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6n-7A0A075B6A6 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6n-7A0A075B6A6 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Trav6n-7A0A075B6A6 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.7□□□□□ -0.06
Trav6n-7A0A075B6A6 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.7□□□□□ -0.06
Trav6n-7A0A075B6A6 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6n-7A0A075B6A6 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6n-7A0A075B6A6 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6n-7A0A075B6A6 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6n-7A0A075B6A6 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6n-7A0A075B6A6 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6n-7A0A075B6A6 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6n-7A0A075B6A6 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.69□□□□□ -0.06
Trav6n-7A0A075B6A6 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trav6n-7A0A075B6A6 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6n-7A0A075B6A6 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC14.69□□□□□ -0.06
Trav6n-7A0A075B6A6 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Trav6n-7A0A075B6A6 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6n-7A0A075B6A6 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Trav6n-7A0A075B6A6 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav6n-7A0A075B6A6 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.69□□□□□ -0.06
Trav6n-7A0A075B6A6 Timm23-208ENSMUST00000226683 750 ntBASIC14.69□□□□□ -0.06
Trav6n-7A0A075B6A6 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6n-7A0A075B6A6 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6n-7A0A075B6A6 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trav6n-7A0A075B6A6 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trav6n-7A0A075B6A6 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6n-7A0A075B6A6 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6n-7A0A075B6A6 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6n-7A0A075B6A6 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6n-7A0A075B6A6 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6n-7A0A075B6A6 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6n-7A0A075B6A6 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6n-7A0A075B6A6 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6n-7A0A075B6A6 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6n-7A0A075B6A6 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav6n-7A0A075B6A6 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6n-7A0A075B6A6 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6n-7A0A075B6A6 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.68□□□□□ -0.06
Trav6n-7A0A075B6A6 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6n-7A0A075B6A6 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6n-7A0A075B6A6 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6n-7A0A075B6A6 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6n-7A0A075B6A6 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav6n-7A0A075B6A6 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav6n-7A0A075B6A6 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6n-7A0A075B6A6 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6n-7A0A075B6A6 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trav6n-7A0A075B6A6 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav6n-7A0A075B6A6 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6n-7A0A075B6A6 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6n-7A0A075B6A6 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trav6n-7A0A075B6A6 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6n-7A0A075B6A6 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6n-7A0A075B6A6 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6n-7A0A075B6A6 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6n-7A0A075B6A6 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6n-7A0A075B6A6 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav6n-7A0A075B6A6 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6n-7A0A075B6A6 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.67□□□□□ -0.06
Trav6n-7A0A075B6A6 Mir5122-201ENSMUST00000175004 89 ntBASIC14.67□□□□□ -0.06
Trav6n-7A0A075B6A6 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6n-7A0A075B6A6 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6n-7A0A075B6A6 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trav6n-7A0A075B6A6 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.67□□□□□ -0.06
Trav6n-7A0A075B6A6 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6n-7A0A075B6A6 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6n-7A0A075B6A6 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6n-7A0A075B6A6 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6n-7A0A075B6A6 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6n-7A0A075B6A6 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6n-7A0A075B6A6 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6n-7A0A075B6A6 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6n-7A0A075B6A6 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms