Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-4A0A075B654 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-4A0A075B654 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-4A0A075B654 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-4A0A075B654 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-4A0A075B654 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-4A0A075B654 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-4A0A075B654 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-4A0A075B654 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-4A0A075B654 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-4A0A075B654 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-4A0A075B654 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-4A0A075B654 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-4A0A075B654 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-4A0A075B654 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav3-4A0A075B654 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-4A0A075B654 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-4A0A075B654 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC11.72□□□□□ -0.53
Trav3-4A0A075B654 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav3-4A0A075B654 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-4A0A075B654 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-4A0A075B654 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Trav3-4A0A075B654 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-4A0A075B654 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-4A0A075B654 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-4A0A075B654 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-4A0A075B654 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-4A0A075B654 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-4A0A075B654 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-4A0A075B654 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav3-4A0A075B654 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-4A0A075B654 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3-4A0A075B654 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3-4A0A075B654 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav3-4A0A075B654 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3-4A0A075B654 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav3-4A0A075B654 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trav3-4A0A075B654 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3-4A0A075B654 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3-4A0A075B654 Gm43566-201ENSMUST00000196851 808 ntBASIC11.71□□□□□ -0.53
Trav3-4A0A075B654 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav3-4A0A075B654 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav3-4A0A075B654 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav3-4A0A075B654 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav3-4A0A075B654 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav3-4A0A075B654 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav3-4A0A075B654 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav3-4A0A075B654 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav3-4A0A075B654 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav3-4A0A075B654 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-4A0A075B654 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-4A0A075B654 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-4A0A075B654 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav3-4A0A075B654 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-4A0A075B654 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-4A0A075B654 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-4A0A075B654 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-4A0A075B654 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav3-4A0A075B654 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-4A0A075B654 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-4A0A075B654 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-4A0A075B654 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-4A0A075B654 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-4A0A075B654 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-4A0A075B654 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-4A0A075B654 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-4A0A075B654 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC11.7□□□□□ -0.54
Trav3-4A0A075B654 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-4A0A075B654 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav3-4A0A075B654 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-4A0A075B654 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-4A0A075B654 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-4A0A075B654 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-4A0A075B654 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-4A0A075B654 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-4A0A075B654 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-4A0A075B654 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Trav3-4A0A075B654 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-4A0A075B654 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-4A0A075B654 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-4A0A075B654 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-4A0A075B654 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-4A0A075B654 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-4A0A075B654 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav3-4A0A075B654 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-4A0A075B654 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-4A0A075B654 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-4A0A075B654 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-4A0A075B654 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Trav3-4A0A075B654 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-4A0A075B654 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav3-4A0A075B654 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-4A0A075B654 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-4A0A075B654 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-4A0A075B654 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-4A0A075B654 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-4A0A075B654 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-4A0A075B654 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-4A0A075B654 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-4A0A075B654 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms