Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-2A0A075B649 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-2A0A075B649 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav13-2A0A075B649 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-2A0A075B649 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-2A0A075B649 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-2A0A075B649 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav13-2A0A075B649 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-2A0A075B649 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-2A0A075B649 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-2A0A075B649 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-2A0A075B649 Gm13146-201ENSMUST00000118508 780 ntBASIC11.68□□□□□ -0.54
Trav13-2A0A075B649 Gm13534-201ENSMUST00000121169 513 ntBASIC11.68□□□□□ -0.54
Trav13-2A0A075B649 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC11.68□□□□□ -0.54
Trav13-2A0A075B649 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC11.68□□□□□ -0.54
Trav13-2A0A075B649 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav13-2A0A075B649 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Trav13-2A0A075B649 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav13-2A0A075B649 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav13-2A0A075B649 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-2A0A075B649 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-2A0A075B649 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-2A0A075B649 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-2A0A075B649 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav13-2A0A075B649 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-2A0A075B649 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-2A0A075B649 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-2A0A075B649 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-2A0A075B649 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-2A0A075B649 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-2A0A075B649 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-2A0A075B649 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav13-2A0A075B649 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13-2A0A075B649 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13-2A0A075B649 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13-2A0A075B649 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13-2A0A075B649 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13-2A0A075B649 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13-2A0A075B649 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav13-2A0A075B649 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC11.67□□□□□ -0.54
Trav13-2A0A075B649 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC11.67□□□□□ -0.54
Trav13-2A0A075B649 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13-2A0A075B649 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav13-2A0A075B649 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13-2A0A075B649 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13-2A0A075B649 Idnk-204ENSMUST00000226010 1898 ntBASIC11.67□□□□□ -0.54
Trav13-2A0A075B649 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13-2A0A075B649 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13-2A0A075B649 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13-2A0A075B649 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13-2A0A075B649 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC11.67□□□□□ -0.54
Trav13-2A0A075B649 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trav13-2A0A075B649 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav13-2A0A075B649 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13-2A0A075B649 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC11.67□□□□□ -0.54
Trav13-2A0A075B649 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-2A0A075B649 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-2A0A075B649 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC11.66□□□□□ -0.54
Trav13-2A0A075B649 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-2A0A075B649 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-2A0A075B649 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-2A0A075B649 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-2A0A075B649 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-2A0A075B649 AC131586.2-201ENSMUST00000228370 1512 ntBASIC11.66□□□□□ -0.54
Trav13-2A0A075B649 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-2A0A075B649 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav13-2A0A075B649 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav13-2A0A075B649 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-2A0A075B649 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC11.66□□□□□ -0.54
Trav13-2A0A075B649 Gm22325-201ENSMUST00000158904 308 ntBASIC11.66□□□□□ -0.54
Trav13-2A0A075B649 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-2A0A075B649 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-2A0A075B649 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-2A0A075B649 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav13-2A0A075B649 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-2A0A075B649 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-2A0A075B649 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-2A0A075B649 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-2A0A075B649 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-2A0A075B649 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-2A0A075B649 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-2A0A075B649 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC11.66□□□□□ -0.54
Trav13-2A0A075B649 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-2A0A075B649 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav13-2A0A075B649 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav13-2A0A075B649 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-2A0A075B649 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-2A0A075B649 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-2A0A075B649 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-2A0A075B649 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13-2A0A075B649 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13-2A0A075B649 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13-2A0A075B649 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav13-2A0A075B649 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Trav13-2A0A075B649 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC11.65□□□□□ -0.54
Trav13-2A0A075B649 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav13-2A0A075B649 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC11.65□□□□□ -0.54
Trav13-2A0A075B649 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13-2A0A075B649 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13-2A0A075B649 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms