Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-1A0A075B644 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-1A0A075B644 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-1A0A075B644 Gm15565-201ENSMUST00000118890 427 ntBASIC12.33□□□□□ -0.44
Trav13-1A0A075B644 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-1A0A075B644 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.33□□□□□ -0.44
Trav13-1A0A075B644 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC12.33□□□□□ -0.44
Trav13-1A0A075B644 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-1A0A075B644 Mir2861-201ENSMUST00000175539 82 ntBASIC12.33□□□□□ -0.44
Trav13-1A0A075B644 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav13-1A0A075B644 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.33□□□□□ -0.44
Trav13-1A0A075B644 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-1A0A075B644 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC12.33□□□□□ -0.44
Trav13-1A0A075B644 AC166341.7-201ENSMUST00000221698 126 ntBASIC12.33□□□□□ -0.44
Trav13-1A0A075B644 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-1A0A075B644 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav13-1A0A075B644 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-1A0A075B644 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trav13-1A0A075B644 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-1A0A075B644 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-1A0A075B644 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-1A0A075B644 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-1A0A075B644 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-1A0A075B644 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav13-1A0A075B644 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-1A0A075B644 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-1A0A075B644 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-1A0A075B644 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-1A0A075B644 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav13-1A0A075B644 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-1A0A075B644 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav13-1A0A075B644 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-1A0A075B644 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-1A0A075B644 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
Trav13-1A0A075B644 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav13-1A0A075B644 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-1A0A075B644 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-1A0A075B644 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-1A0A075B644 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-1A0A075B644 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav13-1A0A075B644 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-1A0A075B644 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-1A0A075B644 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC12.32□□□□□ -0.44
Trav13-1A0A075B644 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-1A0A075B644 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-1A0A075B644 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-1A0A075B644 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.32□□□□□ -0.44
Trav13-1A0A075B644 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.32□□□□□ -0.44
Trav13-1A0A075B644 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC12.32□□□□□ -0.44
Trav13-1A0A075B644 Gm16042-201ENSMUST00000204813 1247 ntBASIC12.32□□□□□ -0.44
Trav13-1A0A075B644 AC156016.1-201ENSMUST00000227190 1035 ntBASIC12.32□□□□□ -0.44
Trav13-1A0A075B644 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-1A0A075B644 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-1A0A075B644 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-1A0A075B644 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-1A0A075B644 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-1A0A075B644 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-1A0A075B644 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-1A0A075B644 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-1A0A075B644 Gm43702-201ENSMUST00000198772 2546 ntBASIC12.32□□□□□ -0.44
Trav13-1A0A075B644 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-1A0A075B644 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-1A0A075B644 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-1A0A075B644 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-1A0A075B644 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-1A0A075B644 Gm10654-201ENSMUST00000098653 1633 ntBASIC12.31□□□□□ -0.44
Trav13-1A0A075B644 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-1A0A075B644 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Trav13-1A0A075B644 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-1A0A075B644 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC12.31□□□□□ -0.44
Trav13-1A0A075B644 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-1A0A075B644 Arhgef4-208ENSMUST00000211073 171 ntBASIC12.31□□□□□ -0.44
Trav13-1A0A075B644 AC135963.1-201ENSMUST00000211640 717 ntBASIC12.31□□□□□ -0.44
Trav13-1A0A075B644 AC158538.1-201ENSMUST00000225870 294 ntBASIC12.31□□□□□ -0.44
Trav13-1A0A075B644 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-1A0A075B644 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trav13-1A0A075B644 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-1A0A075B644 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-1A0A075B644 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-1A0A075B644 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-1A0A075B644 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-1A0A075B644 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-1A0A075B644 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-1A0A075B644 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-1A0A075B644 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-1A0A075B644 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-1A0A075B644 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trav13-1A0A075B644 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-1A0A075B644 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-1A0A075B644 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-1A0A075B644 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-1A0A075B644 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC12.3□□□□□ -0.44
Trav13-1A0A075B644 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-1A0A075B644 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Trav13-1A0A075B644 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-1A0A075B644 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-1A0A075B644 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-1A0A075B644 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-1A0A075B644 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13-1A0A075B644 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms