Protein–RNA interactions for Protein: A0A075B622

Trav10n, T cell receptor alpha variable 10N (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10nA0A075B622 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav10nA0A075B622 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.39■□□□□ 0.05
Trav10nA0A075B622 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav10nA0A075B622 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav10nA0A075B622 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav10nA0A075B622 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav10nA0A075B622 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trav10nA0A075B622 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav10nA0A075B622 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav10nA0A075B622 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.38■□□□□ 0.05
Trav10nA0A075B622 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav10nA0A075B622 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav10nA0A075B622 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
Trav10nA0A075B622 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav10nA0A075B622 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav10nA0A075B622 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trav10nA0A075B622 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav10nA0A075B622 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav10nA0A075B622 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trav10nA0A075B622 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav10nA0A075B622 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav10nA0A075B622 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav10nA0A075B622 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav10nA0A075B622 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav10nA0A075B622 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav10nA0A075B622 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav10nA0A075B622 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav10nA0A075B622 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav10nA0A075B622 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav10nA0A075B622 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav10nA0A075B622 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav10nA0A075B622 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav10nA0A075B622 Gm15378-201ENSMUST00000121894 207 ntBASIC15.37■□□□□ 0.05
Trav10nA0A075B622 Gm27011-201ENSMUST00000182352 972 ntBASIC15.37■□□□□ 0.05
Trav10nA0A075B622 Gm10698-201ENSMUST00000182663 604 ntBASIC15.37■□□□□ 0.05
Trav10nA0A075B622 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav10nA0A075B622 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav10nA0A075B622 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.37■□□□□ 0.05
Trav10nA0A075B622 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav10nA0A075B622 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav10nA0A075B622 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav10nA0A075B622 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trav10nA0A075B622 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav10nA0A075B622 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav10nA0A075B622 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav10nA0A075B622 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav10nA0A075B622 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav10nA0A075B622 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav10nA0A075B622 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav10nA0A075B622 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.36■□□□□ 0.05
Trav10nA0A075B622 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav10nA0A075B622 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.36■□□□□ 0.05
Trav10nA0A075B622 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav10nA0A075B622 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav10nA0A075B622 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav10nA0A075B622 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav10nA0A075B622 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav10nA0A075B622 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav10nA0A075B622 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trav10nA0A075B622 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav10nA0A075B622 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav10nA0A075B622 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.36■□□□□ 0.05
Trav10nA0A075B622 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav10nA0A075B622 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav10nA0A075B622 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav10nA0A075B622 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav10nA0A075B622 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav10nA0A075B622 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav10nA0A075B622 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trav10nA0A075B622 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav10nA0A075B622 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav10nA0A075B622 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav10nA0A075B622 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav10nA0A075B622 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trav10nA0A075B622 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav10nA0A075B622 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav10nA0A075B622 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.35■□□□□ 0.05
Trav10nA0A075B622 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.35■□□□□ 0.05
Trav10nA0A075B622 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.35■□□□□ 0.05
Trav10nA0A075B622 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav10nA0A075B622 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav10nA0A075B622 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav10nA0A075B622 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav10nA0A075B622 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav10nA0A075B622 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav10nA0A075B622 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav10nA0A075B622 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trav10nA0A075B622 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav10nA0A075B622 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav10nA0A075B622 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav10nA0A075B622 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav10nA0A075B622 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Trav10nA0A075B622 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav10nA0A075B622 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav10nA0A075B622 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav10nA0A075B622 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav10nA0A075B622 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trav10nA0A075B622 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav10nA0A075B622 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav10nA0A075B622 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms