Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-6A0A075B603 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav6-6A0A075B603 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav6-6A0A075B603 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav6-6A0A075B603 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav6-6A0A075B603 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC12.94□□□□□ -0.34
Trav6-6A0A075B603 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-6A0A075B603 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-6A0A075B603 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav6-6A0A075B603 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-6A0A075B603 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-6A0A075B603 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-6A0A075B603 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-6A0A075B603 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav6-6A0A075B603 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav6-6A0A075B603 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav6-6A0A075B603 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-6A0A075B603 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-6A0A075B603 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-6A0A075B603 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav6-6A0A075B603 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-6A0A075B603 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC12.93□□□□□ -0.34
Trav6-6A0A075B603 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-6A0A075B603 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-6A0A075B603 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav6-6A0A075B603 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC12.93□□□□□ -0.34
Trav6-6A0A075B603 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-6A0A075B603 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-6A0A075B603 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-6A0A075B603 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC12.93□□□□□ -0.34
Trav6-6A0A075B603 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-6A0A075B603 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-6A0A075B603 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-6A0A075B603 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-6A0A075B603 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-6A0A075B603 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trav6-6A0A075B603 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-6A0A075B603 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-6A0A075B603 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav6-6A0A075B603 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Trav6-6A0A075B603 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-6A0A075B603 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-6A0A075B603 Gm22325-201ENSMUST00000158904 308 ntBASIC12.92□□□□□ -0.34
Trav6-6A0A075B603 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav6-6A0A075B603 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-6A0A075B603 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Trav6-6A0A075B603 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-6A0A075B603 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-6A0A075B603 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trav6-6A0A075B603 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-6A0A075B603 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-6A0A075B603 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-6A0A075B603 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-6A0A075B603 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-6A0A075B603 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-6A0A075B603 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-6A0A075B603 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-6A0A075B603 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Trav6-6A0A075B603 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-6A0A075B603 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.92□□□□□ -0.34
Trav6-6A0A075B603 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-6A0A075B603 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-6A0A075B603 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-6A0A075B603 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Trav6-6A0A075B603 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Trav6-6A0A075B603 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-6A0A075B603 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav6-6A0A075B603 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC12.91□□□□□ -0.34
Trav6-6A0A075B603 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
Trav6-6A0A075B603 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-6A0A075B603 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-6A0A075B603 Gm16401-202ENSMUST00000197463 2074 ntBASIC12.91□□□□□ -0.34
Trav6-6A0A075B603 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-6A0A075B603 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-6A0A075B603 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trav6-6A0A075B603 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav6-6A0A075B603 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav6-6A0A075B603 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-6A0A075B603 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-6A0A075B603 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav6-6A0A075B603 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-6A0A075B603 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-6A0A075B603 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Trav6-6A0A075B603 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-6A0A075B603 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-6A0A075B603 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-6A0A075B603 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-6A0A075B603 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-6A0A075B603 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-6A0A075B603 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav6-6A0A075B603 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-6A0A075B603 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Trav6-6A0A075B603 Gm13216-201ENSMUST00000117145 591 ntBASIC12.9□□□□□ -0.34
Trav6-6A0A075B603 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-6A0A075B603 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-6A0A075B603 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trav6-6A0A075B603 Gm18671-201ENSMUST00000214826 683 ntBASIC12.9□□□□□ -0.34
Trav6-6A0A075B603 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-6A0A075B603 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-6A0A075B603 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms