Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav5-1A0A075B5Z7 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav5-1A0A075B5Z7 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav5-1A0A075B5Z7 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav5-1A0A075B5Z7 Gm16061-201ENSMUST00000122167 857 ntBASIC14.9□□□□□ -0.02
Trav5-1A0A075B5Z7 Gm13474-201ENSMUST00000122466 815 ntBASIC14.9□□□□□ -0.02
Trav5-1A0A075B5Z7 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Trav5-1A0A075B5Z7 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trav5-1A0A075B5Z7 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.9□□□□□ -0.02
Trav5-1A0A075B5Z7 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav5-1A0A075B5Z7 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav5-1A0A075B5Z7 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav5-1A0A075B5Z7 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav5-1A0A075B5Z7 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav5-1A0A075B5Z7 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav5-1A0A075B5Z7 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav5-1A0A075B5Z7 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav5-1A0A075B5Z7 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav5-1A0A075B5Z7 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trav5-1A0A075B5Z7 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trav5-1A0A075B5Z7 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trav5-1A0A075B5Z7 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trav5-1A0A075B5Z7 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav5-1A0A075B5Z7 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Trav5-1A0A075B5Z7 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav5-1A0A075B5Z7 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav5-1A0A075B5Z7 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav5-1A0A075B5Z7 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.89□□□□□ -0.03
Trav5-1A0A075B5Z7 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav5-1A0A075B5Z7 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav5-1A0A075B5Z7 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Trav5-1A0A075B5Z7 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Trav5-1A0A075B5Z7 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav5-1A0A075B5Z7 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Trav5-1A0A075B5Z7 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav5-1A0A075B5Z7 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.89□□□□□ -0.03
Trav5-1A0A075B5Z7 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.89□□□□□ -0.03
Trav5-1A0A075B5Z7 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.89□□□□□ -0.03
Trav5-1A0A075B5Z7 Gm45058-201ENSMUST00000205810 766 ntBASIC14.89□□□□□ -0.03
Trav5-1A0A075B5Z7 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Trav5-1A0A075B5Z7 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav5-1A0A075B5Z7 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav5-1A0A075B5Z7 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav5-1A0A075B5Z7 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav5-1A0A075B5Z7 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.89□□□□□ -0.03
Trav5-1A0A075B5Z7 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav5-1A0A075B5Z7 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav5-1A0A075B5Z7 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trav5-1A0A075B5Z7 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav5-1A0A075B5Z7 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav5-1A0A075B5Z7 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav5-1A0A075B5Z7 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav5-1A0A075B5Z7 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav5-1A0A075B5Z7 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav5-1A0A075B5Z7 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav5-1A0A075B5Z7 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav5-1A0A075B5Z7 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav5-1A0A075B5Z7 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trav5-1A0A075B5Z7 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav5-1A0A075B5Z7 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav5-1A0A075B5Z7 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.88□□□□□ -0.03
Trav5-1A0A075B5Z7 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.88□□□□□ -0.03
Trav5-1A0A075B5Z7 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav5-1A0A075B5Z7 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trav5-1A0A075B5Z7 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Trav5-1A0A075B5Z7 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav5-1A0A075B5Z7 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Trav5-1A0A075B5Z7 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav5-1A0A075B5Z7 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav5-1A0A075B5Z7 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trav5-1A0A075B5Z7 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Trav5-1A0A075B5Z7 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav5-1A0A075B5Z7 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.88□□□□□ -0.03
Trav5-1A0A075B5Z7 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav5-1A0A075B5Z7 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav5-1A0A075B5Z7 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav5-1A0A075B5Z7 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trav5-1A0A075B5Z7 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav5-1A0A075B5Z7 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.87□□□□□ -0.03
Trav5-1A0A075B5Z7 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav5-1A0A075B5Z7 Gm10231-201ENSMUST00000181584 441 ntBASIC14.87□□□□□ -0.03
Trav5-1A0A075B5Z7 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav5-1A0A075B5Z7 Gm10175-202ENSMUST00000208752 441 ntBASIC14.87□□□□□ -0.03
Trav5-1A0A075B5Z7 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trav5-1A0A075B5Z7 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav5-1A0A075B5Z7 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav5-1A0A075B5Z7 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav5-1A0A075B5Z7 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav5-1A0A075B5Z7 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav5-1A0A075B5Z7 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.87□□□□□ -0.03
Trav5-1A0A075B5Z7 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav5-1A0A075B5Z7 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav5-1A0A075B5Z7 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav5-1A0A075B5Z7 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trav5-1A0A075B5Z7 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav5-1A0A075B5Z7 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav5-1A0A075B5Z7 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav5-1A0A075B5Z7 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav5-1A0A075B5Z7 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav5-1A0A075B5Z7 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms