Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav1A0A075B5Z4 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav1A0A075B5Z4 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav1A0A075B5Z4 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav1A0A075B5Z4 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav1A0A075B5Z4 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.1■□□□□ 0.17
Trav1A0A075B5Z4 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav1A0A075B5Z4 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav1A0A075B5Z4 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav1A0A075B5Z4 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Trav1A0A075B5Z4 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav1A0A075B5Z4 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav1A0A075B5Z4 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav1A0A075B5Z4 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trav1A0A075B5Z4 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav1A0A075B5Z4 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Trav1A0A075B5Z4 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav1A0A075B5Z4 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.09■□□□□ 0.17
Trav1A0A075B5Z4 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav1A0A075B5Z4 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav1A0A075B5Z4 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav1A0A075B5Z4 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav1A0A075B5Z4 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Trav1A0A075B5Z4 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav1A0A075B5Z4 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
Trav1A0A075B5Z4 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav1A0A075B5Z4 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav1A0A075B5Z4 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav1A0A075B5Z4 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav1A0A075B5Z4 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.08■□□□□ 0.16
Trav1A0A075B5Z4 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.08■□□□□ 0.16
Trav1A0A075B5Z4 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav1A0A075B5Z4 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav1A0A075B5Z4 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav1A0A075B5Z4 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav1A0A075B5Z4 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav1A0A075B5Z4 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav1A0A075B5Z4 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav1A0A075B5Z4 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Trav1A0A075B5Z4 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav1A0A075B5Z4 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav1A0A075B5Z4 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav1A0A075B5Z4 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.07■□□□□ 0.16
Trav1A0A075B5Z4 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav1A0A075B5Z4 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav1A0A075B5Z4 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav1A0A075B5Z4 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav1A0A075B5Z4 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav1A0A075B5Z4 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.07■□□□□ 0.16
Trav1A0A075B5Z4 Gm10517-202ENSMUST00000192970 758 ntBASIC16.07■□□□□ 0.16
Trav1A0A075B5Z4 Trmt13-210ENSMUST00000198454 880 ntBASIC16.07■□□□□ 0.16
Trav1A0A075B5Z4 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.07■□□□□ 0.16
Trav1A0A075B5Z4 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav1A0A075B5Z4 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav1A0A075B5Z4 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav1A0A075B5Z4 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Trav1A0A075B5Z4 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav1A0A075B5Z4 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.07■□□□□ 0.16
Trav1A0A075B5Z4 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav1A0A075B5Z4 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trav1A0A075B5Z4 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
Trav1A0A075B5Z4 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav1A0A075B5Z4 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav1A0A075B5Z4 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav1A0A075B5Z4 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.06■□□□□ 0.16
Trav1A0A075B5Z4 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav1A0A075B5Z4 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav1A0A075B5Z4 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.06■□□□□ 0.16
Trav1A0A075B5Z4 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav1A0A075B5Z4 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav1A0A075B5Z4 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.06■□□□□ 0.16
Trav1A0A075B5Z4 Gm24841-201ENSMUST00000158676 357 ntBASIC16.06■□□□□ 0.16
Trav1A0A075B5Z4 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.06■□□□□ 0.16
Trav1A0A075B5Z4 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav1A0A075B5Z4 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav1A0A075B5Z4 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav1A0A075B5Z4 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trav1A0A075B5Z4 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
Trav1A0A075B5Z4 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.05■□□□□ 0.16
Trav1A0A075B5Z4 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav1A0A075B5Z4 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.05■□□□□ 0.16
Trav1A0A075B5Z4 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav1A0A075B5Z4 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav1A0A075B5Z4 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav1A0A075B5Z4 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav1A0A075B5Z4 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.05■□□□□ 0.16
Trav1A0A075B5Z4 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav1A0A075B5Z4 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav1A0A075B5Z4 Gm43183-201ENSMUST00000200632 547 ntBASIC16.05■□□□□ 0.16
Trav1A0A075B5Z4 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.05■□□□□ 0.16
Trav1A0A075B5Z4 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav1A0A075B5Z4 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav1A0A075B5Z4 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav1A0A075B5Z4 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav1A0A075B5Z4 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav1A0A075B5Z4 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav1A0A075B5Z4 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav1A0A075B5Z4 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trav1A0A075B5Z4 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav1A0A075B5Z4 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms