Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm35931-201ENSMUST00000203931 448 ntBASIC3.18□□□□□ -1.9
Lsm1Q8VC85 Gm19177-201ENSMUST00000204520 613 ntBASIC3.18□□□□□ -1.9
Lsm1Q8VC85 Gm45105-201ENSMUST00000207824 397 ntBASIC3.18□□□□□ -1.9
Lsm1Q8VC85 Gm9375-201ENSMUST00000208899 903 ntBASIC3.18□□□□□ -1.9
Lsm1Q8VC85 Gm18602-201ENSMUST00000209794 851 ntBASIC3.18□□□□□ -1.9
Lsm1Q8VC85 Gm19219-201ENSMUST00000215863 724 ntBASIC3.18□□□□□ -1.9
Lsm1Q8VC85 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.18□□□□□ -1.9
Lsm1Q8VC85 AC133189.2-201ENSMUST00000228527 392 ntBASIC3.18□□□□□ -1.9
Lsm1Q8VC85 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Lsm1Q8VC85 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Lsm1Q8VC85 Ube2nl-201ENSMUST00000085228 456 ntBASIC3.18□□□□□ -1.9
Lsm1Q8VC85 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
Lsm1Q8VC85 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Lsm1Q8VC85 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Lsm1Q8VC85 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Lsm1Q8VC85 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Lsm1Q8VC85 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Lsm1Q8VC85 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
Lsm1Q8VC85 Gm38090-201ENSMUST00000195733 1942 ntBASIC3.17□□□□□ -1.9
Lsm1Q8VC85 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
Lsm1Q8VC85 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Lsm1Q8VC85 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Lsm1Q8VC85 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC3.17□□□□□ -1.9
Lsm1Q8VC85 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Lsm1Q8VC85 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Lsm1Q8VC85 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Lsm1Q8VC85 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC3.17□□□□□ -1.9
Lsm1Q8VC85 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC3.17□□□□□ -1.9
Lsm1Q8VC85 Gm42852-201ENSMUST00000202649 1379 ntBASIC3.17□□□□□ -1.9
Lsm1Q8VC85 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Lsm1Q8VC85 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Lsm1Q8VC85 Gm12739-201ENSMUST00000119769 382 ntBASIC3.17□□□□□ -1.9
Lsm1Q8VC85 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
Lsm1Q8VC85 Gm14623-201ENSMUST00000121398 603 ntBASIC3.17□□□□□ -1.9
Lsm1Q8VC85 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC3.17□□□□□ -1.9
Lsm1Q8VC85 Gm22516-201ENSMUST00000158266 124 ntBASIC3.17□□□□□ -1.9
Lsm1Q8VC85 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Lsm1Q8VC85 Fth-ps2-201ENSMUST00000168364 516 ntBASIC3.17□□□□□ -1.9
Lsm1Q8VC85 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.17□□□□□ -1.9
Lsm1Q8VC85 AC073947.1-201ENSMUST00000216991 649 ntBASIC3.17□□□□□ -1.9
Lsm1Q8VC85 AC152946.2-201ENSMUST00000219071 337 ntBASIC3.17□□□□□ -1.9
Lsm1Q8VC85 Gm6841-201ENSMUST00000220602 598 ntBASIC3.17□□□□□ -1.9
Lsm1Q8VC85 Gm17872-201ENSMUST00000222550 532 ntBASIC3.17□□□□□ -1.9
Lsm1Q8VC85 AC158142.3-201ENSMUST00000226230 675 ntBASIC3.17□□□□□ -1.9
Lsm1Q8VC85 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.17□□□□□ -1.9
Lsm1Q8VC85 AC115291.2-201ENSMUST00000228335 437 ntBASIC3.17□□□□□ -1.9
Lsm1Q8VC85 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Lsm1Q8VC85 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC3.17□□□□□ -1.9
Lsm1Q8VC85 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Lsm1Q8VC85 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Lsm1Q8VC85 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Lsm1Q8VC85 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Lsm1Q8VC85 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Lsm1Q8VC85 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Lsm1Q8VC85 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Lsm1Q8VC85 Gm7363-201ENSMUST00000119883 399 ntBASIC3.16□□□□□ -1.9
Lsm1Q8VC85 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC3.16□□□□□ -1.9
Lsm1Q8VC85 Gm16026-202ENSMUST00000159695 772 ntBASIC3.16□□□□□ -1.9
Lsm1Q8VC85 Gm4761-201ENSMUST00000178086 582 ntBASIC3.16□□□□□ -1.9
Lsm1Q8VC85 Mir6413-201ENSMUST00000184049 108 ntBASIC3.16□□□□□ -1.9
Lsm1Q8VC85 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC3.16□□□□□ -1.9
Lsm1Q8VC85 Gm29704-201ENSMUST00000196011 253 ntBASIC3.16□□□□□ -1.9
Lsm1Q8VC85 Gm34272-201ENSMUST00000208886 253 ntBASIC3.16□□□□□ -1.9
Lsm1Q8VC85 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Lsm1Q8VC85 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC3.16□□□□□ -1.9
Lsm1Q8VC85 Gm5649-201ENSMUST00000217918 951 ntBASIC3.16□□□□□ -1.9
Lsm1Q8VC85 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC3.16□□□□□ -1.9
Lsm1Q8VC85 Gm17917-201ENSMUST00000218561 953 ntBASIC3.16□□□□□ -1.9
Lsm1Q8VC85 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC3.16□□□□□ -1.9
Lsm1Q8VC85 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.16□□□□□ -1.9
Lsm1Q8VC85 AC157772.2-201ENSMUST00000228202 259 ntBASIC3.16□□□□□ -1.9
Lsm1Q8VC85 AC117588.3-201ENSMUST00000228517 325 ntBASIC3.16□□□□□ -1.9
Lsm1Q8VC85 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC3.16□□□□□ -1.9
Lsm1Q8VC85 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
Lsm1Q8VC85 Olfr512-201ENSMUST00000074730 1056 ntBASIC3.16□□□□□ -1.9
Lsm1Q8VC85 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Lsm1Q8VC85 Gm23136-201ENSMUST00000083425 99 ntBASIC3.16□□□□□ -1.9
Lsm1Q8VC85 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Lsm1Q8VC85 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
Lsm1Q8VC85 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Lsm1Q8VC85 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Lsm1Q8VC85 Gm44438-201ENSMUST00000204388 3236 ntBASIC3.15□□□□□ -1.9
Lsm1Q8VC85 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Lsm1Q8VC85 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
Lsm1Q8VC85 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.15□□□□□ -1.9
Lsm1Q8VC85 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Lsm1Q8VC85 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Lsm1Q8VC85 Mir294-201ENSMUST00000104710 84 ntBASIC3.15□□□□□ -1.91
Lsm1Q8VC85 Gm9850-201ENSMUST00000117916 227 ntBASIC3.15□□□□□ -1.91
Lsm1Q8VC85 Gm12803-201ENSMUST00000118907 821 ntBASIC3.15□□□□□ -1.91
Lsm1Q8VC85 Gm13873-201ENSMUST00000119208 427 ntBASIC3.15□□□□□ -1.91
Lsm1Q8VC85 Gm8260-201ENSMUST00000119230 353 ntBASIC3.15□□□□□ -1.91
Lsm1Q8VC85 Gm24289-201ENSMUST00000157629 135 ntBASIC3.15□□□□□ -1.91
Lsm1Q8VC85 Gm3123-201ENSMUST00000163480 480 ntBASIC3.15□□□□□ -1.91
Lsm1Q8VC85 Mir3104-201ENSMUST00000174911 63 ntBASIC3.15□□□□□ -1.91
Lsm1Q8VC85 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.15□□□□□ -1.91
Lsm1Q8VC85 Gm21816-201ENSMUST00000179255 360 ntBASIC3.15□□□□□ -1.91
Lsm1Q8VC85 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC3.15□□□□□ -1.91
Lsm1Q8VC85 Gm28002-201ENSMUST00000184832 100 ntBASIC3.15□□□□□ -1.91
Lsm1Q8VC85 Gm19637-201ENSMUST00000185933 579 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms