Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm37639-201ENSMUST00000191623 2785 ntBASIC4.48□□□□□ -1.69
Clrn1Q8K445 Gm37761-201ENSMUST00000194989 2098 ntBASIC4.48□□□□□ -1.69
Clrn1Q8K445 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Clrn1Q8K445 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC4.48□□□□□ -1.69
Clrn1Q8K445 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
Clrn1Q8K445 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Clrn1Q8K445 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Clrn1Q8K445 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Clrn1Q8K445 AC154227.1-201ENSMUST00000228809 2467 ntBASIC4.48□□□□□ -1.69
Clrn1Q8K445 AC108802.1-201ENSMUST00000219501 3142 ntBASIC4.48□□□□□ -1.69
Clrn1Q8K445 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
Clrn1Q8K445 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Clrn1Q8K445 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
Clrn1Q8K445 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Clrn1Q8K445 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Clrn1Q8K445 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Clrn1Q8K445 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Clrn1Q8K445 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
Clrn1Q8K445 Gm44789-201ENSMUST00000207195 3101 ntBASIC4.47□□□□□ -1.69
Clrn1Q8K445 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC4.47□□□□□ -1.69
Clrn1Q8K445 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Clrn1Q8K445 Gm24578-201ENSMUST00000103970 129 ntBASIC4.47□□□□□ -1.69
Clrn1Q8K445 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC4.47□□□□□ -1.69
Clrn1Q8K445 Gm12803-201ENSMUST00000118907 821 ntBASIC4.47□□□□□ -1.69
Clrn1Q8K445 Gm15231-201ENSMUST00000119174 447 ntBASIC4.47□□□□□ -1.69
Clrn1Q8K445 Gm15745-201ENSMUST00000119807 115 ntBASIC4.47□□□□□ -1.69
Clrn1Q8K445 Gm13239-201ENSMUST00000119920 637 ntBASIC4.47□□□□□ -1.69
Clrn1Q8K445 Gm14049-201ENSMUST00000121009 636 ntBASIC4.47□□□□□ -1.69
Clrn1Q8K445 Gm13007-201ENSMUST00000121866 365 ntBASIC4.47□□□□□ -1.69
Clrn1Q8K445 Gm8121-201ENSMUST00000153583 499 ntBASIC4.47□□□□□ -1.69
Clrn1Q8K445 Gm25827-201ENSMUST00000157089 107 ntBASIC4.47□□□□□ -1.69
Clrn1Q8K445 Gm25666-201ENSMUST00000157702 107 ntBASIC4.47□□□□□ -1.69
Clrn1Q8K445 Gm23473-201ENSMUST00000158883 116 ntBASIC4.47□□□□□ -1.69
Clrn1Q8K445 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC4.47□□□□□ -1.69
Clrn1Q8K445 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC4.47□□□□□ -1.69
Clrn1Q8K445 Gm26828-201ENSMUST00000180640 172 ntBASIC4.47□□□□□ -1.69
Clrn1Q8K445 Gm28255-201ENSMUST00000187101 694 ntBASIC4.47□□□□□ -1.69
Clrn1Q8K445 Gm28389-201ENSMUST00000190090 697 ntBASIC4.47□□□□□ -1.69
Clrn1Q8K445 Gm17775-201ENSMUST00000198542 258 ntBASIC4.47□□□□□ -1.69
Clrn1Q8K445 Gm44261-201ENSMUST00000203337 209 ntBASIC4.47□□□□□ -1.69
Clrn1Q8K445 Gm44718-201ENSMUST00000206886 359 ntBASIC4.47□□□□□ -1.69
Clrn1Q8K445 Gm7675-201ENSMUST00000208828 686 ntBASIC4.47□□□□□ -1.69
Clrn1Q8K445 Gm45438-201ENSMUST00000210242 564 ntBASIC4.47□□□□□ -1.69
Clrn1Q8K445 Gm5023-201ENSMUST00000217442 587 ntBASIC4.47□□□□□ -1.69
Clrn1Q8K445 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC4.47□□□□□ -1.69
Clrn1Q8K445 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC4.47□□□□□ -1.69
Clrn1Q8K445 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC4.47□□□□□ -1.69
Clrn1Q8K445 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC4.47□□□□□ -1.69
Clrn1Q8K445 Ear-ps9-202ENSMUST00000226796 245 ntBASIC4.47□□□□□ -1.69
Clrn1Q8K445 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Clrn1Q8K445 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Clrn1Q8K445 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Clrn1Q8K445 Gm25792-201ENSMUST00000083289 100 ntBASIC4.47□□□□□ -1.69
Clrn1Q8K445 Mir17-201ENSMUST00000083574 84 ntBASIC4.47□□□□□ -1.69
Clrn1Q8K445 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Clrn1Q8K445 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC4.47□□□□□ -1.69
Clrn1Q8K445 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC4.47□□□□□ -1.69
Clrn1Q8K445 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Clrn1Q8K445 Gm37212-201ENSMUST00000192582 3650 ntBASIC4.47□□□□□ -1.69
Clrn1Q8K445 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Clrn1Q8K445 AC101945.4-201ENSMUST00000228464 1976 ntBASIC4.47□□□□□ -1.69
Clrn1Q8K445 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Clrn1Q8K445 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Clrn1Q8K445 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Clrn1Q8K445 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Clrn1Q8K445 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
Clrn1Q8K445 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC4.46□□□□□ -1.69
Clrn1Q8K445 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
Clrn1Q8K445 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC4.46□□□□□ -1.69
Clrn1Q8K445 Gm37195-201ENSMUST00000192006 3018 ntBASIC4.46□□□□□ -1.69
Clrn1Q8K445 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Clrn1Q8K445 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Clrn1Q8K445 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Clrn1Q8K445 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC4.46□□□□□ -1.7
Clrn1Q8K445 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Clrn1Q8K445 Gm12285-201ENSMUST00000117347 233 ntBASIC4.46□□□□□ -1.7
Clrn1Q8K445 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC4.46□□□□□ -1.7
Clrn1Q8K445 Gm9059-201ENSMUST00000118319 183 ntBASIC4.46□□□□□ -1.7
Clrn1Q8K445 Gm12806-201ENSMUST00000119384 268 ntBASIC4.46□□□□□ -1.7
Clrn1Q8K445 Gm9043-201ENSMUST00000119677 314 ntBASIC4.46□□□□□ -1.7
Clrn1Q8K445 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC4.46□□□□□ -1.7
Clrn1Q8K445 Gm13409-201ENSMUST00000122072 546 ntBASIC4.46□□□□□ -1.7
Clrn1Q8K445 Gm24439-201ENSMUST00000157894 117 ntBASIC4.46□□□□□ -1.7
Clrn1Q8K445 Gm25243-201ENSMUST00000174912 207 ntBASIC4.46□□□□□ -1.7
Clrn1Q8K445 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC4.46□□□□□ -1.7
Clrn1Q8K445 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC4.46□□□□□ -1.7
Clrn1Q8K445 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC4.46□□□□□ -1.7
Clrn1Q8K445 Gm24100-201ENSMUST00000178592 79 ntBASIC4.46□□□□□ -1.7
Clrn1Q8K445 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC4.46□□□□□ -1.7
Clrn1Q8K445 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC4.46□□□□□ -1.7
Clrn1Q8K445 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Clrn1Q8K445 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC4.46□□□□□ -1.7
Clrn1Q8K445 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC4.46□□□□□ -1.7
Clrn1Q8K445 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC4.46□□□□□ -1.7
Clrn1Q8K445 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC4.46□□□□□ -1.7
Clrn1Q8K445 Gm24137-201ENSMUST00000180055 79 ntBASIC4.46□□□□□ -1.7
Clrn1Q8K445 Gm22391-201ENSMUST00000180356 79 ntBASIC4.46□□□□□ -1.7
Clrn1Q8K445 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Clrn1Q8K445 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Clrn1Q8K445 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 123.3 ms