Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Rnu3a-201ENSMUST00000083936 214 ntBASIC5.6□□□□□ -1.51
Trim56Q80VI1 Olfr203-201ENSMUST00000089305 924 ntBASIC5.6□□□□□ -1.51
Trim56Q80VI1 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
Trim56Q80VI1 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim56Q80VI1 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Trim56Q80VI1 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim56Q80VI1 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim56Q80VI1 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.6□□□□□ -1.51
Trim56Q80VI1 Gm43011-201ENSMUST00000197897 4433 ntBASIC5.6□□□□□ -1.51
Trim56Q80VI1 AC162938.2-205ENSMUST00000217551 2828 ntBASIC5.59□□□□□ -1.51
Trim56Q80VI1 Gm37488-201ENSMUST00000195434 3374 ntBASIC5.59□□□□□ -1.51
Trim56Q80VI1 Gm37226-201ENSMUST00000191644 3255 ntBASIC5.59□□□□□ -1.51
Trim56Q80VI1 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Trim56Q80VI1 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Trim56Q80VI1 Gm23594-201ENSMUST00000104307 134 ntBASIC5.59□□□□□ -1.51
Trim56Q80VI1 Gm13085-201ENSMUST00000118356 171 ntBASIC5.59□□□□□ -1.51
Trim56Q80VI1 Gm15951-201ENSMUST00000118377 400 ntBASIC5.59□□□□□ -1.51
Trim56Q80VI1 Gm16179-201ENSMUST00000120685 373 ntBASIC5.59□□□□□ -1.51
Trim56Q80VI1 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim56Q80VI1 Gm25966-201ENSMUST00000157169 117 ntBASIC5.59□□□□□ -1.51
Trim56Q80VI1 Gm25982-201ENSMUST00000157920 101 ntBASIC5.59□□□□□ -1.51
Trim56Q80VI1 Gm24857-201ENSMUST00000158061 310 ntBASIC5.59□□□□□ -1.51
Trim56Q80VI1 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC5.59□□□□□ -1.51
Trim56Q80VI1 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim56Q80VI1 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC5.59□□□□□ -1.51
Trim56Q80VI1 Gm38044-201ENSMUST00000192964 487 ntBASIC5.59□□□□□ -1.51
Trim56Q80VI1 Gm44161-201ENSMUST00000203532 253 ntBASIC5.59□□□□□ -1.51
Trim56Q80VI1 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC5.59□□□□□ -1.51
Trim56Q80VI1 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC5.59□□□□□ -1.51
Trim56Q80VI1 AL662807.1-201ENSMUST00000224183 126 ntBASIC5.59□□□□□ -1.51
Trim56Q80VI1 AC154640.2-201ENSMUST00000226324 472 ntBASIC5.59□□□□□ -1.51
Trim56Q80VI1 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.59□□□□□ -1.51
Trim56Q80VI1 AC155237.2-201ENSMUST00000228487 478 ntBASIC5.59□□□□□ -1.51
Trim56Q80VI1 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim56Q80VI1 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Trim56Q80VI1 Gm23927-201ENSMUST00000082466 215 ntBASIC5.59□□□□□ -1.51
Trim56Q80VI1 Gm23679-201ENSMUST00000083161 119 ntBASIC5.59□□□□□ -1.51
Trim56Q80VI1 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim56Q80VI1 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC5.59□□□□□ -1.51
Trim56Q80VI1 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC5.59□□□□□ -1.51
Trim56Q80VI1 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Trim56Q80VI1 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC5.59□□□□□ -1.51
Trim56Q80VI1 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Trim56Q80VI1 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim56Q80VI1 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.52
Trim56Q80VI1 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Trim56Q80VI1 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC5.59□□□□□ -1.52
Trim56Q80VI1 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Trim56Q80VI1 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim56Q80VI1 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim56Q80VI1 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim56Q80VI1 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim56Q80VI1 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim56Q80VI1 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim56Q80VI1 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim56Q80VI1 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC5.58□□□□□ -1.52
Trim56Q80VI1 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Trim56Q80VI1 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Trim56Q80VI1 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim56Q80VI1 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
Trim56Q80VI1 Gm37268-201ENSMUST00000192254 2614 ntBASIC5.58□□□□□ -1.52
Trim56Q80VI1 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC5.58□□□□□ -1.52
Trim56Q80VI1 Gm15206-201ENSMUST00000119143 454 ntBASIC5.58□□□□□ -1.52
Trim56Q80VI1 Gm11742-201ENSMUST00000119903 233 ntBASIC5.58□□□□□ -1.52
Trim56Q80VI1 Gm14049-201ENSMUST00000121009 636 ntBASIC5.58□□□□□ -1.52
Trim56Q80VI1 Gm14577-201ENSMUST00000121134 256 ntBASIC5.58□□□□□ -1.52
Trim56Q80VI1 Gm13406-201ENSMUST00000121991 256 ntBASIC5.58□□□□□ -1.52
Trim56Q80VI1 Gm13745-201ENSMUST00000121994 527 ntBASIC5.58□□□□□ -1.52
Trim56Q80VI1 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC5.58□□□□□ -1.52
Trim56Q80VI1 Gm25150-201ENSMUST00000157121 60 ntBASIC5.58□□□□□ -1.52
Trim56Q80VI1 Gm7925-201ENSMUST00000166690 401 ntBASIC5.58□□□□□ -1.52
Trim56Q80VI1 Gm21978-201ENSMUST00000179696 377 ntBASIC5.58□□□□□ -1.52
Trim56Q80VI1 Gm27690-201ENSMUST00000184596 126 ntBASIC5.58□□□□□ -1.52
Trim56Q80VI1 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC5.58□□□□□ -1.52
Trim56Q80VI1 Gm18728-201ENSMUST00000186155 753 ntBASIC5.58□□□□□ -1.52
Trim56Q80VI1 Gm3145-201ENSMUST00000188584 220 ntBASIC5.58□□□□□ -1.52
Trim56Q80VI1 Gm38008-201ENSMUST00000195333 518 ntBASIC5.58□□□□□ -1.52
Trim56Q80VI1 Gm43723-201ENSMUST00000196886 189 ntBASIC5.58□□□□□ -1.52
Trim56Q80VI1 Gm44011-201ENSMUST00000203336 394 ntBASIC5.58□□□□□ -1.52
Trim56Q80VI1 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC5.58□□□□□ -1.52
Trim56Q80VI1 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC5.58□□□□□ -1.52
Trim56Q80VI1 Gm45236-201ENSMUST00000208632 229 ntBASIC5.58□□□□□ -1.52
Trim56Q80VI1 Gm17766-201ENSMUST00000209223 442 ntBASIC5.58□□□□□ -1.52
Trim56Q80VI1 AC166902.1-201ENSMUST00000216653 517 ntBASIC5.58□□□□□ -1.52
Trim56Q80VI1 AC113031.3-201ENSMUST00000226552 190 ntBASIC5.58□□□□□ -1.52
Trim56Q80VI1 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Trim56Q80VI1 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Trim56Q80VI1 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Trim56Q80VI1 Snord42a-201ENSMUST00000082606 65 ntBASIC5.58□□□□□ -1.52
Trim56Q80VI1 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
Trim56Q80VI1 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
Trim56Q80VI1 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim56Q80VI1 AC122887.2-201ENSMUST00000219465 1603 ntBASIC5.58□□□□□ -1.52
Trim56Q80VI1 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim56Q80VI1 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
Trim56Q80VI1 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim56Q80VI1 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
Trim56Q80VI1 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim56Q80VI1 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
Trim56Q80VI1 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms