Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm43188-201ENSMUST00000200180 2160 ntBASIC4.82□□□□□ -1.64
Scaf4Q6PFF0 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Scaf4Q6PFF0 Gm44822-201ENSMUST00000208559 6389 ntBASIC4.82□□□□□ -1.64
Scaf4Q6PFF0 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
Scaf4Q6PFF0 Gm5117-201ENSMUST00000178878 2553 ntBASIC4.82□□□□□ -1.64
Scaf4Q6PFF0 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC4.82□□□□□ -1.64
Scaf4Q6PFF0 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Scaf4Q6PFF0 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC4.82□□□□□ -1.64
Scaf4Q6PFF0 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Scaf4Q6PFF0 Gm14240-201ENSMUST00000120353 546 ntBASIC4.82□□□□□ -1.64
Scaf4Q6PFF0 Gm14428-201ENSMUST00000120408 822 ntBASIC4.82□□□□□ -1.64
Scaf4Q6PFF0 Gm11403-201ENSMUST00000122195 369 ntBASIC4.82□□□□□ -1.64
Scaf4Q6PFF0 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC4.82□□□□□ -1.64
Scaf4Q6PFF0 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC4.82□□□□□ -1.64
Scaf4Q6PFF0 Gm7609-204ENSMUST00000161424 461 ntBASIC4.82□□□□□ -1.64
Scaf4Q6PFF0 Gm3531-201ENSMUST00000162698 489 ntBASIC4.82□□□□□ -1.64
Scaf4Q6PFF0 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC4.82□□□□□ -1.64
Scaf4Q6PFF0 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC4.82□□□□□ -1.64
Scaf4Q6PFF0 Mir5624-201ENSMUST00000176635 61 ntBASIC4.82□□□□□ -1.64
Scaf4Q6PFF0 Mir6382-201ENSMUST00000184055 110 ntBASIC4.82□□□□□ -1.64
Scaf4Q6PFF0 Gm9443-201ENSMUST00000188406 816 ntBASIC4.82□□□□□ -1.64
Scaf4Q6PFF0 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Scaf4Q6PFF0 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Scaf4Q6PFF0 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Scaf4Q6PFF0 Ighv1-44-201ENSMUST00000195597 352 ntBASIC4.82□□□□□ -1.64
Scaf4Q6PFF0 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Scaf4Q6PFF0 Gm42828-201ENSMUST00000199669 469 ntBASIC4.82□□□□□ -1.64
Scaf4Q6PFF0 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Scaf4Q6PFF0 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.82□□□□□ -1.64
Scaf4Q6PFF0 Gm19131-201ENSMUST00000203408 789 ntBASIC4.82□□□□□ -1.64
Scaf4Q6PFF0 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Scaf4Q6PFF0 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Scaf4Q6PFF0 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC4.82□□□□□ -1.64
Scaf4Q6PFF0 Gm46369-201ENSMUST00000221577 401 ntBASIC4.82□□□□□ -1.64
Scaf4Q6PFF0 AC159621.1-201ENSMUST00000223249 163 ntBASIC4.82□□□□□ -1.64
Scaf4Q6PFF0 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC4.82□□□□□ -1.64
Scaf4Q6PFF0 AC123665.6-201ENSMUST00000228568 538 ntBASIC4.82□□□□□ -1.64
Scaf4Q6PFF0 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Scaf4Q6PFF0 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Scaf4Q6PFF0 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Scaf4Q6PFF0 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Scaf4Q6PFF0 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Scaf4Q6PFF0 Gm13961-201ENSMUST00000119282 4772 ntBASIC4.82□□□□□ -1.64
Scaf4Q6PFF0 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Gm16332-201ENSMUST00000134229 2967 ntBASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 AC131720.1-201ENSMUST00000218629 2132 ntBASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Gm24715-201ENSMUST00000102377 95 ntBASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 n-R5s16-201ENSMUST00000104555 119 ntBASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Gm3362-201ENSMUST00000148102 466 ntBASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Mir1970-201ENSMUST00000157839 104 ntBASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Mir3058-201ENSMUST00000175126 91 ntBASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Gm27028-201ENSMUST00000182303 399 ntBASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Gm27960-201ENSMUST00000183445 184 ntBASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Gm28847-201ENSMUST00000186778 700 ntBASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Gm29668-201ENSMUST00000187802 315 ntBASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Gm37272-201ENSMUST00000193401 488 ntBASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Gm43601-201ENSMUST00000196294 945 ntBASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Igkv12-40-201ENSMUST00000199208 347 ntBASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Gm4734-201ENSMUST00000200117 777 ntBASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Gm42458-201ENSMUST00000201914 369 ntBASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Gm7838-201ENSMUST00000203221 1189 ntBASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 AC158641.1-201ENSMUST00000218933 229 ntBASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Gm18116-201ENSMUST00000220920 537 ntBASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Mir19a-201ENSMUST00000083482 82 ntBASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Gm10222-201ENSMUST00000088336 294 ntBASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Gm6043-201ENSMUST00000099961 492 ntBASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 AC122317.3-201ENSMUST00000219320 3524 ntBASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 Gm37562-201ENSMUST00000194763 4328 ntBASIC4.81□□□□□ -1.64
Scaf4Q6PFF0 AC159308.1-201ENSMUST00000216615 1351 ntBASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Scaf4Q6PFF0 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 98.4 ms