Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm45555-201ENSMUST00000210028 2602 ntBASIC5.19□□□□□ -1.58
Sh3rf1Q69ZI1 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Sh3rf1Q69ZI1 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Sh3rf1Q69ZI1 Gm13355-201ENSMUST00000117996 317 ntBASIC5.19□□□□□ -1.58
Sh3rf1Q69ZI1 Gm13787-201ENSMUST00000120422 168 ntBASIC5.19□□□□□ -1.58
Sh3rf1Q69ZI1 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC5.19□□□□□ -1.58
Sh3rf1Q69ZI1 Gm26102-201ENSMUST00000157251 284 ntBASIC5.19□□□□□ -1.58
Sh3rf1Q69ZI1 Gm17086-201ENSMUST00000171346 484 ntBASIC5.19□□□□□ -1.58
Sh3rf1Q69ZI1 Snora15-201ENSMUST00000177461 131 ntBASIC5.19□□□□□ -1.58
Sh3rf1Q69ZI1 Gm23660-201ENSMUST00000178362 79 ntBASIC5.19□□□□□ -1.58
Sh3rf1Q69ZI1 Gm24088-201ENSMUST00000179100 79 ntBASIC5.19□□□□□ -1.58
Sh3rf1Q69ZI1 Mir6400-201ENSMUST00000184870 92 ntBASIC5.19□□□□□ -1.58
Sh3rf1Q69ZI1 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC5.19□□□□□ -1.58
Sh3rf1Q69ZI1 Gm2950-201ENSMUST00000185530 520 ntBASIC5.19□□□□□ -1.58
Sh3rf1Q69ZI1 Gm19641-201ENSMUST00000188432 417 ntBASIC5.19□□□□□ -1.58
Sh3rf1Q69ZI1 Igkv15-101-201ENSMUST00000195917 299 ntBASIC5.19□□□□□ -1.58
Sh3rf1Q69ZI1 Gm18100-201ENSMUST00000200897 452 ntBASIC5.19□□□□□ -1.58
Sh3rf1Q69ZI1 Gm44336-201ENSMUST00000203696 468 ntBASIC5.19□□□□□ -1.58
Sh3rf1Q69ZI1 Gm6012-201ENSMUST00000210821 730 ntBASIC5.19□□□□□ -1.58
Sh3rf1Q69ZI1 Gm45616-201ENSMUST00000211711 319 ntBASIC5.19□□□□□ -1.58
Sh3rf1Q69ZI1 Gm46997-201ENSMUST00000222108 217 ntBASIC5.19□□□□□ -1.58
Sh3rf1Q69ZI1 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Sh3rf1Q69ZI1 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Sh3rf1Q69ZI1 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Sh3rf1Q69ZI1 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Sh3rf1Q69ZI1 Mir30b-201ENSMUST00000083542 96 ntBASIC5.19□□□□□ -1.58
Sh3rf1Q69ZI1 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Sh3rf1Q69ZI1 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
Sh3rf1Q69ZI1 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Sh3rf1Q69ZI1 Gm19666-201ENSMUST00000198176 1893 ntBASIC5.19□□□□□ -1.58
Sh3rf1Q69ZI1 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC5.19□□□□□ -1.58
Sh3rf1Q69ZI1 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Sh3rf1Q69ZI1 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Sh3rf1Q69ZI1 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC5.19□□□□□ -1.58
Sh3rf1Q69ZI1 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Sh3rf1Q69ZI1 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Sh3rf1Q69ZI1 Gm42729-201ENSMUST00000201770 2930 ntBASIC5.18□□□□□ -1.58
Sh3rf1Q69ZI1 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sh3rf1Q69ZI1 Gm23593-201ENSMUST00000104309 120 ntBASIC5.18□□□□□ -1.58
Sh3rf1Q69ZI1 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sh3rf1Q69ZI1 Gm22482-201ENSMUST00000122563 359 ntBASIC5.18□□□□□ -1.58
Sh3rf1Q69ZI1 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC5.18□□□□□ -1.58
Sh3rf1Q69ZI1 Gm25383-201ENSMUST00000157810 144 ntBASIC5.18□□□□□ -1.58
Sh3rf1Q69ZI1 Gm22326-201ENSMUST00000158897 351 ntBASIC5.18□□□□□ -1.58
Sh3rf1Q69ZI1 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sh3rf1Q69ZI1 Gm3053-201ENSMUST00000161709 616 ntBASIC5.18□□□□□ -1.58
Sh3rf1Q69ZI1 Gm17109-201ENSMUST00000163985 358 ntBASIC5.18□□□□□ -1.58
Sh3rf1Q69ZI1 Gm24618-201ENSMUST00000177718 94 ntBASIC5.18□□□□□ -1.58
Sh3rf1Q69ZI1 Gm23953-201ENSMUST00000178214 94 ntBASIC5.18□□□□□ -1.58
Sh3rf1Q69ZI1 Gm22448-201ENSMUST00000179254 107 ntBASIC5.18□□□□□ -1.58
Sh3rf1Q69ZI1 Gm26332-201ENSMUST00000179813 94 ntBASIC5.18□□□□□ -1.58
Sh3rf1Q69ZI1 Gm22863-201ENSMUST00000180265 94 ntBASIC5.18□□□□□ -1.58
Sh3rf1Q69ZI1 Gm28660-201ENSMUST00000186496 253 ntBASIC5.18□□□□□ -1.58
Sh3rf1Q69ZI1 Gm28976-201ENSMUST00000188070 144 ntBASIC5.18□□□□□ -1.58
Sh3rf1Q69ZI1 Gm37272-201ENSMUST00000193401 488 ntBASIC5.18□□□□□ -1.58
Sh3rf1Q69ZI1 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC5.18□□□□□ -1.58
Sh3rf1Q69ZI1 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC5.18□□□□□ -1.58
Sh3rf1Q69ZI1 Gm43601-201ENSMUST00000196294 945 ntBASIC5.18□□□□□ -1.58
Sh3rf1Q69ZI1 Gm8874-201ENSMUST00000196826 286 ntBASIC5.18□□□□□ -1.58
Sh3rf1Q69ZI1 Gm8132-201ENSMUST00000204938 640 ntBASIC5.18□□□□□ -1.58
Sh3rf1Q69ZI1 Gm45215-201ENSMUST00000206407 395 ntBASIC5.18□□□□□ -1.58
Sh3rf1Q69ZI1 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC5.18□□□□□ -1.58
Sh3rf1Q69ZI1 AC125531.1-201ENSMUST00000219849 221 ntBASIC5.18□□□□□ -1.58
Sh3rf1Q69ZI1 AC135019.1-201ENSMUST00000219949 307 ntBASIC5.18□□□□□ -1.58
Sh3rf1Q69ZI1 AC125484.1-201ENSMUST00000223218 234 ntBASIC5.18□□□□□ -1.58
Sh3rf1Q69ZI1 CT010486.1-201ENSMUST00000224609 422 ntBASIC5.18□□□□□ -1.58
Sh3rf1Q69ZI1 Gm10088-201ENSMUST00000074116 423 ntBASIC5.18□□□□□ -1.58
Sh3rf1Q69ZI1 Gm25126-201ENSMUST00000083343 102 ntBASIC5.18□□□□□ -1.58
Sh3rf1Q69ZI1 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Sh3rf1Q69ZI1 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sh3rf1Q69ZI1 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
Sh3rf1Q69ZI1 Gm42484-201ENSMUST00000196075 2104 ntBASIC5.18□□□□□ -1.58
Sh3rf1Q69ZI1 Gm37558-201ENSMUST00000193684 2983 ntBASIC5.18□□□□□ -1.58
Sh3rf1Q69ZI1 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sh3rf1Q69ZI1 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC5.18□□□□□ -1.58
Sh3rf1Q69ZI1 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC5.18□□□□□ -1.58
Sh3rf1Q69ZI1 Gm42548-201ENSMUST00000202669 3933 ntBASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 Gm23941-201ENSMUST00000101953 107 ntBASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 Gm24889-201ENSMUST00000104388 132 ntBASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 Gm12087-201ENSMUST00000121878 258 ntBASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 n-R5s61-201ENSMUST00000122711 118 ntBASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 Gm16358-201ENSMUST00000146046 210 ntBASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 Gm23169-201ENSMUST00000157157 112 ntBASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 Gm23965-201ENSMUST00000157969 142 ntBASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 Gm23546-201ENSMUST00000158211 137 ntBASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 Gm4761-201ENSMUST00000178086 582 ntBASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 Gm37123-201ENSMUST00000192994 1171 ntBASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 Mirlet7e-201ENSMUST00000196737 93 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms