Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Gm22245-201ENSMUST00000082479 103 ntBASIC3.14□□□□□ -1.91
Vsx2Q61412 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
Vsx2Q61412 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Vsx2Q61412 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.13□□□□□ -1.91
Vsx2Q61412 Gm6545-201ENSMUST00000217186 1786 ntBASIC3.13□□□□□ -1.91
Vsx2Q61412 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Vsx2Q61412 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.13□□□□□ -1.91
Vsx2Q61412 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Vsx2Q61412 Gm6274-201ENSMUST00000118173 797 ntBASIC3.13□□□□□ -1.91
Vsx2Q61412 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.13□□□□□ -1.91
Vsx2Q61412 Gm13511-201ENSMUST00000121167 363 ntBASIC3.13□□□□□ -1.91
Vsx2Q61412 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
Vsx2Q61412 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC3.13□□□□□ -1.91
Vsx2Q61412 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC3.13□□□□□ -1.91
Vsx2Q61412 Gm24819-201ENSMUST00000175094 166 ntBASIC3.13□□□□□ -1.91
Vsx2Q61412 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Vsx2Q61412 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Vsx2Q61412 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Vsx2Q61412 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Vsx2Q61412 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Vsx2Q61412 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Vsx2Q61412 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Vsx2Q61412 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Vsx2Q61412 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Vsx2Q61412 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Vsx2Q61412 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Vsx2Q61412 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Vsx2Q61412 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Vsx2Q61412 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Vsx2Q61412 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Vsx2Q61412 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Vsx2Q61412 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Vsx2Q61412 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Vsx2Q61412 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Vsx2Q61412 Gm37104-201ENSMUST00000193278 196 ntBASIC3.13□□□□□ -1.91
Vsx2Q61412 Gm33973-201ENSMUST00000195148 534 ntBASIC3.13□□□□□ -1.91
Vsx2Q61412 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC3.13□□□□□ -1.91
Vsx2Q61412 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Vsx2Q61412 Gm44513-201ENSMUST00000206811 439 ntBASIC3.13□□□□□ -1.91
Vsx2Q61412 Gm18585-201ENSMUST00000215197 556 ntBASIC3.13□□□□□ -1.91
Vsx2Q61412 Gm7530-201ENSMUST00000218466 605 ntBASIC3.13□□□□□ -1.91
Vsx2Q61412 AL662807.1-201ENSMUST00000224183 126 ntBASIC3.13□□□□□ -1.91
Vsx2Q61412 AC151902.1-201ENSMUST00000227800 375 ntBASIC3.13□□□□□ -1.91
Vsx2Q61412 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Vsx2Q61412 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Vsx2Q61412 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Vsx2Q61412 Gm10237-201ENSMUST00000078393 273 ntBASIC3.13□□□□□ -1.91
Vsx2Q61412 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Vsx2Q61412 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Vsx2Q61412 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Vsx2Q61412 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
Vsx2Q61412 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Vsx2Q61412 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.13□□□□□ -1.91
Vsx2Q61412 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Vsx2Q61412 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.12□□□□□ -1.91
Vsx2Q61412 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.12□□□□□ -1.91
Vsx2Q61412 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Vsx2Q61412 Gm19335-201ENSMUST00000195836 2069 ntBASIC3.12□□□□□ -1.91
Vsx2Q61412 Gm12568-201ENSMUST00000117362 624 ntBASIC3.12□□□□□ -1.91
Vsx2Q61412 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.12□□□□□ -1.91
Vsx2Q61412 Gm15001-201ENSMUST00000117657 795 ntBASIC3.12□□□□□ -1.91
Vsx2Q61412 Gm13379-201ENSMUST00000118053 621 ntBASIC3.12□□□□□ -1.91
Vsx2Q61412 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.12□□□□□ -1.91
Vsx2Q61412 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.12□□□□□ -1.91
Vsx2Q61412 Gm12090-201ENSMUST00000118692 758 ntBASIC3.12□□□□□ -1.91
Vsx2Q61412 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Vsx2Q61412 Gm10075-201ENSMUST00000162030 545 ntBASIC3.12□□□□□ -1.91
Vsx2Q61412 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Vsx2Q61412 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
Vsx2Q61412 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Vsx2Q61412 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.12□□□□□ -1.91
Vsx2Q61412 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC3.12□□□□□ -1.91
Vsx2Q61412 Gm43765-201ENSMUST00000196303 893 ntBASIC3.12□□□□□ -1.91
Vsx2Q61412 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.12□□□□□ -1.91
Vsx2Q61412 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC3.12□□□□□ -1.91
Vsx2Q61412 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Vsx2Q61412 AC124489.2-201ENSMUST00000223930 589 ntBASIC3.12□□□□□ -1.91
Vsx2Q61412 CT025525.3-201ENSMUST00000228858 366 ntBASIC3.12□□□□□ -1.91
Vsx2Q61412 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Vsx2Q61412 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Vsx2Q61412 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Vsx2Q61412 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Vsx2Q61412 Gm26064-201ENSMUST00000083381 109 ntBASIC3.12□□□□□ -1.91
Vsx2Q61412 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.12□□□□□ -1.91
Vsx2Q61412 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC3.12□□□□□ -1.91
Vsx2Q61412 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Vsx2Q61412 Gm42968-201ENSMUST00000198578 1372 ntBASIC3.12□□□□□ -1.91
Vsx2Q61412 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Vsx2Q61412 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Vsx2Q61412 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Vsx2Q61412 Gm38090-201ENSMUST00000195733 1942 ntBASIC3.11□□□□□ -1.91
Vsx2Q61412 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Vsx2Q61412 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Vsx2Q61412 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.11□□□□□ -1.91
Vsx2Q61412 Gm11433-201ENSMUST00000118318 228 ntBASIC3.11□□□□□ -1.91
Vsx2Q61412 Gm22345-201ENSMUST00000122644 107 ntBASIC3.11□□□□□ -1.91
Vsx2Q61412 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.11□□□□□ -1.91
Vsx2Q61412 Gm8289-201ENSMUST00000144814 1182 ntBASIC3.11□□□□□ -1.91
Vsx2Q61412 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC3.11□□□□□ -1.91
Vsx2Q61412 Gm23716-201ENSMUST00000157348 144 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 94 ms