Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm30280-201ENSMUST00000192214 262 ntBASIC4.92□□□□□ -1.62
Sox9Q04887 Gm37658-201ENSMUST00000192672 315 ntBASIC4.92□□□□□ -1.62
Sox9Q04887 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC4.92□□□□□ -1.62
Sox9Q04887 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC4.92□□□□□ -1.62
Sox9Q04887 Gm3010-201ENSMUST00000198805 448 ntBASIC4.92□□□□□ -1.62
Sox9Q04887 Gm42850-201ENSMUST00000202094 201 ntBASIC4.92□□□□□ -1.62
Sox9Q04887 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC4.92□□□□□ -1.62
Sox9Q04887 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Sox9Q04887 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Sox9Q04887 CT010455.1-201ENSMUST00000218579 413 ntBASIC4.92□□□□□ -1.62
Sox9Q04887 AC158633.1-201ENSMUST00000219892 649 ntBASIC4.92□□□□□ -1.62
Sox9Q04887 AC104832.1-201ENSMUST00000222938 550 ntBASIC4.92□□□□□ -1.62
Sox9Q04887 CT025602.1-201ENSMUST00000227281 382 ntBASIC4.92□□□□□ -1.62
Sox9Q04887 AC158142.2-201ENSMUST00000227892 635 ntBASIC4.92□□□□□ -1.62
Sox9Q04887 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Sox9Q04887 Gm25475-201ENSMUST00000082825 180 ntBASIC4.92□□□□□ -1.62
Sox9Q04887 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Sox9Q04887 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC4.92□□□□□ -1.62
Sox9Q04887 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC4.92□□□□□ -1.62
Sox9Q04887 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.92□□□□□ -1.62
Sox9Q04887 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Sox9Q04887 Zscan4a-201ENSMUST00000210573 2279 ntBASIC4.92□□□□□ -1.62
Sox9Q04887 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Sox9Q04887 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Sox9Q04887 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Sox9Q04887 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Sox9Q04887 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Sox9Q04887 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Sox9Q04887 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Sox9Q04887 Gm15399-201ENSMUST00000118055 724 ntBASIC4.91□□□□□ -1.62
Sox9Q04887 Gm14560-201ENSMUST00000118672 375 ntBASIC4.91□□□□□ -1.62
Sox9Q04887 Gm15981-201ENSMUST00000119196 457 ntBASIC4.91□□□□□ -1.62
Sox9Q04887 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC4.91□□□□□ -1.62
Sox9Q04887 n-R5s21-201ENSMUST00000122692 117 ntBASIC4.91□□□□□ -1.62
Sox9Q04887 Gm22434-201ENSMUST00000158549 122 ntBASIC4.91□□□□□ -1.62
Sox9Q04887 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC4.91□□□□□ -1.62
Sox9Q04887 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC4.91□□□□□ -1.62
Sox9Q04887 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC4.91□□□□□ -1.62
Sox9Q04887 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC4.91□□□□□ -1.62
Sox9Q04887 Gm22631-201ENSMUST00000179656 94 ntBASIC4.91□□□□□ -1.62
Sox9Q04887 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC4.91□□□□□ -1.62
Sox9Q04887 Gm29045-201ENSMUST00000187278 698 ntBASIC4.91□□□□□ -1.62
Sox9Q04887 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC4.91□□□□□ -1.62
Sox9Q04887 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC4.91□□□□□ -1.62
Sox9Q04887 Gm44149-201ENSMUST00000204256 226 ntBASIC4.91□□□□□ -1.62
Sox9Q04887 AC115750.1-201ENSMUST00000220441 567 ntBASIC4.91□□□□□ -1.62
Sox9Q04887 AC122448.1-201ENSMUST00000226317 772 ntBASIC4.91□□□□□ -1.62
Sox9Q04887 AC154600.1-201ENSMUST00000226480 714 ntBASIC4.91□□□□□ -1.62
Sox9Q04887 AC158142.1-201ENSMUST00000226721 416 ntBASIC4.91□□□□□ -1.62
Sox9Q04887 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Sox9Q04887 n-R5s94-201ENSMUST00000082573 119 ntBASIC4.91□□□□□ -1.62
Sox9Q04887 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC4.91□□□□□ -1.62
Sox9Q04887 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Sox9Q04887 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Sox9Q04887 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Sox9Q04887 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
Sox9Q04887 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Sox9Q04887 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Sox9Q04887 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Sox9Q04887 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC4.91□□□□□ -1.62
Sox9Q04887 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC4.9□□□□□ -1.62
Sox9Q04887 Gm37814-201ENSMUST00000195820 3644 ntBASIC4.9□□□□□ -1.62
Sox9Q04887 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Sox9Q04887 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Sox9Q04887 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
Sox9Q04887 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
Sox9Q04887 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Sox9Q04887 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC4.9□□□□□ -1.62
Sox9Q04887 Mir551b-201ENSMUST00000102165 98 ntBASIC4.9□□□□□ -1.63
Sox9Q04887 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Sox9Q04887 Gm15058-201ENSMUST00000117689 458 ntBASIC4.9□□□□□ -1.63
Sox9Q04887 Gm15267-201ENSMUST00000120888 464 ntBASIC4.9□□□□□ -1.63
Sox9Q04887 Gm23206-201ENSMUST00000122720 184 ntBASIC4.9□□□□□ -1.63
Sox9Q04887 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC4.9□□□□□ -1.63
Sox9Q04887 Gm9498-201ENSMUST00000140849 291 ntBASIC4.9□□□□□ -1.63
Sox9Q04887 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Sox9Q04887 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Sox9Q04887 Gm20657-201ENSMUST00000177079 515 ntBASIC4.9□□□□□ -1.63
Sox9Q04887 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
Sox9Q04887 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Sox9Q04887 Gm28785-201ENSMUST00000187478 379 ntBASIC4.9□□□□□ -1.63
Sox9Q04887 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC4.9□□□□□ -1.63
Sox9Q04887 AC122464.1-201ENSMUST00000202789 770 ntBASIC4.9□□□□□ -1.63
Sox9Q04887 Gm29848-201ENSMUST00000203107 295 ntBASIC4.9□□□□□ -1.63
Sox9Q04887 Gm18258-201ENSMUST00000210413 542 ntBASIC4.9□□□□□ -1.63
Sox9Q04887 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Sox9Q04887 AC125020.2-201ENSMUST00000218894 348 ntBASIC4.9□□□□□ -1.63
Sox9Q04887 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Sox9Q04887 Gm6462-201ENSMUST00000081488 304 ntBASIC4.9□□□□□ -1.63
Sox9Q04887 Mir383-201ENSMUST00000083523 70 ntBASIC4.9□□□□□ -1.63
Sox9Q04887 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Sox9Q04887 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.9□□□□□ -1.63
Sox9Q04887 Gm37588-201ENSMUST00000195024 2496 ntBASIC4.9□□□□□ -1.63
Sox9Q04887 Gm43209-201ENSMUST00000198949 1588 ntBASIC4.9□□□□□ -1.63
Sox9Q04887 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.9□□□□□ -1.63
Sox9Q04887 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Sox9Q04887 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Sox9Q04887 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC4.9□□□□□ -1.63
Sox9Q04887 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
Sox9Q04887 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms