Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC4□□□□□ -1.77
Cbx4O55187 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC4□□□□□ -1.77
Cbx4O55187 Gm38080-201ENSMUST00000194035 268 ntBASIC4□□□□□ -1.77
Cbx4O55187 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC4□□□□□ -1.77
Cbx4O55187 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC4□□□□□ -1.77
Cbx4O55187 Gm4045-201ENSMUST00000204076 310 ntBASIC4□□□□□ -1.77
Cbx4O55187 Gm45146-201ENSMUST00000207108 221 ntBASIC4□□□□□ -1.77
Cbx4O55187 Gm10988-201ENSMUST00000209150 1088 ntBASIC4□□□□□ -1.77
Cbx4O55187 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC4□□□□□ -1.77
Cbx4O55187 CT025680.1-201ENSMUST00000217375 375 ntBASIC4□□□□□ -1.77
Cbx4O55187 Gm29884-201ENSMUST00000218403 453 ntBASIC4□□□□□ -1.77
Cbx4O55187 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC4□□□□□ -1.77
Cbx4O55187 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC4□□□□□ -1.77
Cbx4O55187 Gm23939-201ENSMUST00000082880 133 ntBASIC4□□□□□ -1.77
Cbx4O55187 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
Cbx4O55187 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
Cbx4O55187 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC4□□□□□ -1.77
Cbx4O55187 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC4□□□□□ -1.77
Cbx4O55187 Gm38699-201ENSMUST00000221301 1740 ntBASIC4□□□□□ -1.77
Cbx4O55187 Gm43594-201ENSMUST00000201153 3442 ntBASIC4□□□□□ -1.77
Cbx4O55187 Gm8744-201ENSMUST00000204475 3581 ntBASIC4□□□□□ -1.77
Cbx4O55187 AC153969.1-201ENSMUST00000214047 2605 ntBASIC4□□□□□ -1.77
Cbx4O55187 Gm42927-201ENSMUST00000200624 3841 ntBASIC4□□□□□ -1.77
Cbx4O55187 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Cbx4O55187 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Cbx4O55187 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Cbx4O55187 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Cbx4O55187 AC135119.1-201ENSMUST00000227935 3717 ntBASIC3.99□□□□□ -1.77
Cbx4O55187 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Cbx4O55187 Gm23691-201ENSMUST00000101878 107 ntBASIC3.99□□□□□ -1.77
Cbx4O55187 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Cbx4O55187 Gm15176-201ENSMUST00000117734 135 ntBASIC3.99□□□□□ -1.77
Cbx4O55187 Gm14142-201ENSMUST00000117833 296 ntBASIC3.99□□□□□ -1.77
Cbx4O55187 Gm14731-201ENSMUST00000119216 376 ntBASIC3.99□□□□□ -1.77
Cbx4O55187 Gm11506-201ENSMUST00000122414 470 ntBASIC3.99□□□□□ -1.77
Cbx4O55187 Gm22613-201ENSMUST00000122679 292 ntBASIC3.99□□□□□ -1.77
Cbx4O55187 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Cbx4O55187 Gm25456-201ENSMUST00000157952 109 ntBASIC3.99□□□□□ -1.77
Cbx4O55187 Gm16490-201ENSMUST00000165299 351 ntBASIC3.99□□□□□ -1.77
Cbx4O55187 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Cbx4O55187 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Cbx4O55187 Gm22307-201ENSMUST00000180019 107 ntBASIC3.99□□□□□ -1.77
Cbx4O55187 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Cbx4O55187 Mir6393-201ENSMUST00000183709 94 ntBASIC3.99□□□□□ -1.77
Cbx4O55187 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC3.99□□□□□ -1.77
Cbx4O55187 Gm18185-201ENSMUST00000186725 667 ntBASIC3.99□□□□□ -1.77
Cbx4O55187 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC3.99□□□□□ -1.77
Cbx4O55187 Gm28927-201ENSMUST00000191528 272 ntBASIC3.99□□□□□ -1.77
Cbx4O55187 Trbv22-201ENSMUST00000191697 291 ntBASIC3.99□□□□□ -1.77
Cbx4O55187 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Cbx4O55187 Gm38069-201ENSMUST00000195360 2144 ntBASIC3.99□□□□□ -1.77
Cbx4O55187 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC3.99□□□□□ -1.77
Cbx4O55187 Gm42828-201ENSMUST00000199669 469 ntBASIC3.99□□□□□ -1.77
Cbx4O55187 Gm45192-201ENSMUST00000206749 283 ntBASIC3.99□□□□□ -1.77
Cbx4O55187 Gm19032-201ENSMUST00000208584 592 ntBASIC3.99□□□□□ -1.77
Cbx4O55187 Gm6303-201ENSMUST00000210123 471 ntBASIC3.99□□□□□ -1.77
Cbx4O55187 AC093926.1-201ENSMUST00000213730 243 ntBASIC3.99□□□□□ -1.77
Cbx4O55187 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Cbx4O55187 AC109214.2-201ENSMUST00000220089 358 ntBASIC3.99□□□□□ -1.77
Cbx4O55187 AC126673.2-201ENSMUST00000221052 686 ntBASIC3.99□□□□□ -1.77
Cbx4O55187 AC124569.4-201ENSMUST00000223830 1220 ntBASIC3.99□□□□□ -1.77
Cbx4O55187 CT030705.1-201ENSMUST00000223971 533 ntBASIC3.99□□□□□ -1.77
Cbx4O55187 AC154305.1-201ENSMUST00000224443 450 ntBASIC3.99□□□□□ -1.77
Cbx4O55187 AC154245.1-201ENSMUST00000224615 601 ntBASIC3.99□□□□□ -1.77
Cbx4O55187 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
Cbx4O55187 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Cbx4O55187 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Cbx4O55187 Gm22293-201ENSMUST00000083314 109 ntBASIC3.99□□□□□ -1.77
Cbx4O55187 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Cbx4O55187 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
Cbx4O55187 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Cbx4O55187 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Cbx4O55187 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Cbx4O55187 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
Cbx4O55187 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Cbx4O55187 AC147615.2-201ENSMUST00000219876 2154 ntBASIC3.99□□□□□ -1.77
Cbx4O55187 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Cbx4O55187 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Cbx4O55187 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Cbx4O55187 Gm5248-201ENSMUST00000186108 4046 ntBASIC3.98□□□□□ -1.77
Cbx4O55187 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Cbx4O55187 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Cbx4O55187 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
Cbx4O55187 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
Cbx4O55187 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC3.98□□□□□ -1.77
Cbx4O55187 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC3.98□□□□□ -1.77
Cbx4O55187 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC3.98□□□□□ -1.77
Cbx4O55187 Gm22771-201ENSMUST00000104449 91 ntBASIC3.98□□□□□ -1.77
Cbx4O55187 Gm23319-201ENSMUST00000104467 131 ntBASIC3.98□□□□□ -1.77
Cbx4O55187 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC3.98□□□□□ -1.77
Cbx4O55187 Gm25177-201ENSMUST00000122634 117 ntBASIC3.98□□□□□ -1.77
Cbx4O55187 Gm5963-201ENSMUST00000143451 236 ntBASIC3.98□□□□□ -1.77
Cbx4O55187 Gm24438-201ENSMUST00000157893 115 ntBASIC3.98□□□□□ -1.77
Cbx4O55187 Gm25334-201ENSMUST00000158036 110 ntBASIC3.98□□□□□ -1.77
Cbx4O55187 Gm22637-201ENSMUST00000158144 283 ntBASIC3.98□□□□□ -1.77
Cbx4O55187 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Cbx4O55187 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Cbx4O55187 Gm21070-201ENSMUST00000182425 985 ntBASIC3.98□□□□□ -1.77
Cbx4O55187 Mir6996-201ENSMUST00000183922 61 ntBASIC3.98□□□□□ -1.77
Cbx4O55187 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 117.3 ms