Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
Ccdc38Q8CDN8 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC4□□□□□ -1.77
Ccdc38Q8CDN8 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC4□□□□□ -1.77
Ccdc38Q8CDN8 Gm43201-201ENSMUST00000195925 3416 ntBASIC3.99□□□□□ -1.77
Ccdc38Q8CDN8 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Ccdc38Q8CDN8 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Ccdc38Q8CDN8 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC3.99□□□□□ -1.77
Ccdc38Q8CDN8 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Ccdc38Q8CDN8 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Ccdc38Q8CDN8 Gm11881-201ENSMUST00000119408 572 ntBASIC3.99□□□□□ -1.77
Ccdc38Q8CDN8 Gm14599-201ENSMUST00000120469 474 ntBASIC3.99□□□□□ -1.77
Ccdc38Q8CDN8 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.99□□□□□ -1.77
Ccdc38Q8CDN8 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Ccdc38Q8CDN8 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC3.99□□□□□ -1.77
Ccdc38Q8CDN8 Gm9613-201ENSMUST00000171662 196 ntBASIC3.99□□□□□ -1.77
Ccdc38Q8CDN8 Gm27903-201ENSMUST00000175482 126 ntBASIC3.99□□□□□ -1.77
Ccdc38Q8CDN8 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC3.99□□□□□ -1.77
Ccdc38Q8CDN8 Gm19898-201ENSMUST00000177490 251 ntBASIC3.99□□□□□ -1.77
Ccdc38Q8CDN8 Gm5527-201ENSMUST00000179821 642 ntBASIC3.99□□□□□ -1.77
Ccdc38Q8CDN8 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.99□□□□□ -1.77
Ccdc38Q8CDN8 Gm10292-201ENSMUST00000183142 581 ntBASIC3.99□□□□□ -1.77
Ccdc38Q8CDN8 Gm27834-201ENSMUST00000183427 125 ntBASIC3.99□□□□□ -1.77
Ccdc38Q8CDN8 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC3.99□□□□□ -1.77
Ccdc38Q8CDN8 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC3.99□□□□□ -1.77
Ccdc38Q8CDN8 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Ccdc38Q8CDN8 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.99□□□□□ -1.77
Ccdc38Q8CDN8 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Ccdc38Q8CDN8 Gm37343-201ENSMUST00000192542 111 ntBASIC3.99□□□□□ -1.77
Ccdc38Q8CDN8 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.99□□□□□ -1.77
Ccdc38Q8CDN8 Gm38018-201ENSMUST00000195651 540 ntBASIC3.99□□□□□ -1.77
Ccdc38Q8CDN8 Gm18340-201ENSMUST00000196342 609 ntBASIC3.99□□□□□ -1.77
Ccdc38Q8CDN8 Gm43239-201ENSMUST00000200131 201 ntBASIC3.99□□□□□ -1.77
Ccdc38Q8CDN8 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC3.99□□□□□ -1.77
Ccdc38Q8CDN8 Gm31520-201ENSMUST00000203048 733 ntBASIC3.99□□□□□ -1.77
Ccdc38Q8CDN8 AC154257.2-201ENSMUST00000224166 340 ntBASIC3.99□□□□□ -1.77
Ccdc38Q8CDN8 AC158981.3-201ENSMUST00000226844 1024 ntBASIC3.99□□□□□ -1.77
Ccdc38Q8CDN8 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Ccdc38Q8CDN8 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Ccdc38Q8CDN8 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Ccdc38Q8CDN8 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Ccdc38Q8CDN8 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Ccdc38Q8CDN8 Olfr203-201ENSMUST00000089305 924 ntBASIC3.99□□□□□ -1.77
Ccdc38Q8CDN8 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.99□□□□□ -1.77
Ccdc38Q8CDN8 Gm44800-201ENSMUST00000207510 1855 ntBASIC3.98□□□□□ -1.77
Ccdc38Q8CDN8 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.98□□□□□ -1.77
Ccdc38Q8CDN8 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.98□□□□□ -1.77
Ccdc38Q8CDN8 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC3.98□□□□□ -1.77
Ccdc38Q8CDN8 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.98□□□□□ -1.77
Ccdc38Q8CDN8 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Ccdc38Q8CDN8 Gm26418-201ENSMUST00000104275 137 ntBASIC3.98□□□□□ -1.77
Ccdc38Q8CDN8 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
Ccdc38Q8CDN8 Gm11898-201ENSMUST00000117161 385 ntBASIC3.98□□□□□ -1.77
Ccdc38Q8CDN8 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC3.98□□□□□ -1.77
Ccdc38Q8CDN8 Gm14172-201ENSMUST00000118255 644 ntBASIC3.98□□□□□ -1.77
Ccdc38Q8CDN8 Gm9119-201ENSMUST00000118866 495 ntBASIC3.98□□□□□ -1.77
Ccdc38Q8CDN8 Gm5942-201ENSMUST00000120046 439 ntBASIC3.98□□□□□ -1.77
Ccdc38Q8CDN8 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Ccdc38Q8CDN8 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Ccdc38Q8CDN8 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.98□□□□□ -1.77
Ccdc38Q8CDN8 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC3.98□□□□□ -1.77
Ccdc38Q8CDN8 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Ccdc38Q8CDN8 Gm37698-201ENSMUST00000192605 463 ntBASIC3.98□□□□□ -1.77
Ccdc38Q8CDN8 Gm19418-201ENSMUST00000197436 580 ntBASIC3.98□□□□□ -1.77
Ccdc38Q8CDN8 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC3.98□□□□□ -1.77
Ccdc38Q8CDN8 AC130673.2-201ENSMUST00000228091 797 ntBASIC3.98□□□□□ -1.77
Ccdc38Q8CDN8 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC3.98□□□□□ -1.77
Ccdc38Q8CDN8 Gm25205-201ENSMUST00000082841 103 ntBASIC3.98□□□□□ -1.77
Ccdc38Q8CDN8 Gm26203-201ENSMUST00000082911 114 ntBASIC3.98□□□□□ -1.77
Ccdc38Q8CDN8 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.98□□□□□ -1.77
Ccdc38Q8CDN8 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Ccdc38Q8CDN8 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.98□□□□□ -1.77
Ccdc38Q8CDN8 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.97□□□□□ -1.77
Ccdc38Q8CDN8 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC3.97□□□□□ -1.77
Ccdc38Q8CDN8 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Ccdc38Q8CDN8 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Ccdc38Q8CDN8 Gm11406-201ENSMUST00000117418 484 ntBASIC3.97□□□□□ -1.77
Ccdc38Q8CDN8 Gm14103-201ENSMUST00000119075 366 ntBASIC3.97□□□□□ -1.77
Ccdc38Q8CDN8 Gm11625-201ENSMUST00000119535 296 ntBASIC3.97□□□□□ -1.77
Ccdc38Q8CDN8 Gm12543-201ENSMUST00000120410 543 ntBASIC3.97□□□□□ -1.77
Ccdc38Q8CDN8 Gm14577-201ENSMUST00000121134 256 ntBASIC3.97□□□□□ -1.77
Ccdc38Q8CDN8 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.97□□□□□ -1.77
Ccdc38Q8CDN8 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC3.97□□□□□ -1.77
Ccdc38Q8CDN8 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC3.97□□□□□ -1.77
Ccdc38Q8CDN8 Gm22339-201ENSMUST00000157718 62 ntBASIC3.97□□□□□ -1.77
Ccdc38Q8CDN8 Gm28010-201ENSMUST00000179485 126 ntBASIC3.97□□□□□ -1.77
Ccdc38Q8CDN8 Gm6113-201ENSMUST00000180319 639 ntBASIC3.97□□□□□ -1.77
Ccdc38Q8CDN8 Mir6933-201ENSMUST00000184982 81 ntBASIC3.97□□□□□ -1.77
Ccdc38Q8CDN8 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC3.97□□□□□ -1.77
Ccdc38Q8CDN8 Gm19774-201ENSMUST00000190667 114 ntBASIC3.97□□□□□ -1.77
Ccdc38Q8CDN8 Gm37575-201ENSMUST00000195467 309 ntBASIC3.97□□□□□ -1.77
Ccdc38Q8CDN8 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Ccdc38Q8CDN8 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Ccdc38Q8CDN8 Gm43531-201ENSMUST00000200676 1114 ntBASIC3.97□□□□□ -1.77
Ccdc38Q8CDN8 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Ccdc38Q8CDN8 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.97□□□□□ -1.77
Ccdc38Q8CDN8 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Ccdc38Q8CDN8 Gm9712-201ENSMUST00000210842 311 ntBASIC3.97□□□□□ -1.77
Ccdc38Q8CDN8 Gm18644-201ENSMUST00000211458 815 ntBASIC3.97□□□□□ -1.77
Ccdc38Q8CDN8 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC3.97□□□□□ -1.77
Ccdc38Q8CDN8 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.97□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms