Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC2.54□□□□□ -2
Col6a6Q8C6K9 Gm7327-201ENSMUST00000120925 652 ntBASIC2.54□□□□□ -2
Col6a6Q8C6K9 Gm7855-201ENSMUST00000137737 687 ntBASIC2.54□□□□□ -2
Col6a6Q8C6K9 Gm25116-201ENSMUST00000157191 122 ntBASIC2.54□□□□□ -2
Col6a6Q8C6K9 Gm22961-201ENSMUST00000157964 106 ntBASIC2.54□□□□□ -2
Col6a6Q8C6K9 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
Col6a6Q8C6K9 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC2.54□□□□□ -2
Col6a6Q8C6K9 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC2.54□□□□□ -2
Col6a6Q8C6K9 Gm45735-201ENSMUST00000212779 319 ntBASIC2.54□□□□□ -2
Col6a6Q8C6K9 AC162934.1-201ENSMUST00000222880 309 ntBASIC2.54□□□□□ -2
Col6a6Q8C6K9 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC2.54□□□□□ -2
Col6a6Q8C6K9 Olfr192-201ENSMUST00000080251 925 ntBASIC2.54□□□□□ -2
Col6a6Q8C6K9 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
Col6a6Q8C6K9 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Col6a6Q8C6K9 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Col6a6Q8C6K9 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC2.54□□□□□ -2
Col6a6Q8C6K9 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
Col6a6Q8C6K9 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC2.54□□□□□ -2
Col6a6Q8C6K9 Gm42841-201ENSMUST00000199806 1932 ntBASIC2.54□□□□□ -2
Col6a6Q8C6K9 Gm13788-201ENSMUST00000120767 601 ntBASIC2.54□□□□□ -2
Col6a6Q8C6K9 Gm12288-201ENSMUST00000121054 1282 ntBASIC2.54□□□□□ -2
Col6a6Q8C6K9 Gm22730-201ENSMUST00000158085 171 ntBASIC2.54□□□□□ -2
Col6a6Q8C6K9 Gm44319-201ENSMUST00000196974 93 ntBASIC2.54□□□□□ -2
Col6a6Q8C6K9 AC160134.1-201ENSMUST00000213450 551 ntBASIC2.54□□□□□ -2
Col6a6Q8C6K9 AC168059.2-201ENSMUST00000224473 333 ntBASIC2.54□□□□□ -2
Col6a6Q8C6K9 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Col6a6Q8C6K9 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Col6a6Q8C6K9 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC2.54□□□□□ -2
Col6a6Q8C6K9 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Col6a6Q8C6K9 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Col6a6Q8C6K9 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC2.53□□□□□ -2
Col6a6Q8C6K9 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Col6a6Q8C6K9 Gm6797-201ENSMUST00000119440 512 ntBASIC2.53□□□□□ -2
Col6a6Q8C6K9 Gm24075-201ENSMUST00000158175 72 ntBASIC2.53□□□□□ -2
Col6a6Q8C6K9 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC2.53□□□□□ -2
Col6a6Q8C6K9 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC2.53□□□□□ -2
Col6a6Q8C6K9 AC160984.2-201ENSMUST00000224927 791 ntBASIC2.53□□□□□ -2
Col6a6Q8C6K9 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Col6a6Q8C6K9 Gm38031-201ENSMUST00000191819 3015 ntBASIC2.53□□□□□ -2
Col6a6Q8C6K9 Gm44220-201ENSMUST00000203784 2487 ntBASIC2.53□□□□□ -2
Col6a6Q8C6K9 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Col6a6Q8C6K9 AC151831.1-201ENSMUST00000227609 4033 ntBASIC2.53□□□□□ -2
Col6a6Q8C6K9 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Col6a6Q8C6K9 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC2.53□□□□□ -2
Col6a6Q8C6K9 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC2.53□□□□□ -2
Col6a6Q8C6K9 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC2.53□□□□□ -2
Col6a6Q8C6K9 Gm8580-201ENSMUST00000160295 464 ntBASIC2.53□□□□□ -2
Col6a6Q8C6K9 Mir7242-201ENSMUST00000183710 79 ntBASIC2.53□□□□□ -2
Col6a6Q8C6K9 Mir6715-201ENSMUST00000184990 57 ntBASIC2.53□□□□□ -2
Col6a6Q8C6K9 Gm8392-201ENSMUST00000185647 835 ntBASIC2.53□□□□□ -2
Col6a6Q8C6K9 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC2.53□□□□□ -2
Col6a6Q8C6K9 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC2.53□□□□□ -2
Col6a6Q8C6K9 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC2.53□□□□□ -2
Col6a6Q8C6K9 Gm43704-201ENSMUST00000196164 496 ntBASIC2.53□□□□□ -2
Col6a6Q8C6K9 Gm18867-201ENSMUST00000198022 1179 ntBASIC2.53□□□□□ -2
Col6a6Q8C6K9 Gm45551-201ENSMUST00000211459 928 ntBASIC2.53□□□□□ -2
Col6a6Q8C6K9 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC2.53□□□□□ -2
Col6a6Q8C6K9 Gm26449-201ENSMUST00000082452 104 ntBASIC2.53□□□□□ -2
Col6a6Q8C6K9 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Col6a6Q8C6K9 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC2.53□□□□□ -2.01
Col6a6Q8C6K9 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2.01
Col6a6Q8C6K9 AC152159.1-201ENSMUST00000226719 2769 ntBASIC2.52□□□□□ -2.01
Col6a6Q8C6K9 Gm18491-201ENSMUST00000192492 1594 ntBASIC2.52□□□□□ -2.01
Col6a6Q8C6K9 Gm23895-201ENSMUST00000158108 160 ntBASIC2.52□□□□□ -2.01
Col6a6Q8C6K9 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC2.52□□□□□ -2.01
Col6a6Q8C6K9 Gm44519-201ENSMUST00000206486 122 ntBASIC2.52□□□□□ -2.01
Col6a6Q8C6K9 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC2.52□□□□□ -2.01
Col6a6Q8C6K9 Gm23847-201ENSMUST00000083829 110 ntBASIC2.52□□□□□ -2.01
Col6a6Q8C6K9 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Col6a6Q8C6K9 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.52□□□□□ -2.01
Col6a6Q8C6K9 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
Col6a6Q8C6K9 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Col6a6Q8C6K9 Gm14843-201ENSMUST00000119596 212 ntBASIC2.52□□□□□ -2.01
Col6a6Q8C6K9 Gm14506-201ENSMUST00000121165 536 ntBASIC2.52□□□□□ -2.01
Col6a6Q8C6K9 Gm23213-201ENSMUST00000122715 313 ntBASIC2.52□□□□□ -2.01
Col6a6Q8C6K9 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Col6a6Q8C6K9 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.52□□□□□ -2.01
Col6a6Q8C6K9 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
Col6a6Q8C6K9 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC2.52□□□□□ -2.01
Col6a6Q8C6K9 Gm6850-201ENSMUST00000210031 530 ntBASIC2.52□□□□□ -2.01
Col6a6Q8C6K9 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC2.52□□□□□ -2.01
Col6a6Q8C6K9 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
Col6a6Q8C6K9 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC2.51□□□□□ -2.01
Col6a6Q8C6K9 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
Col6a6Q8C6K9 Gm6574-201ENSMUST00000120037 362 ntBASIC2.51□□□□□ -2.01
Col6a6Q8C6K9 Gm27700-201ENSMUST00000185003 81 ntBASIC2.51□□□□□ -2.01
Col6a6Q8C6K9 Gm18000-201ENSMUST00000212153 800 ntBASIC2.51□□□□□ -2.01
Col6a6Q8C6K9 Gm2436-201ENSMUST00000219562 774 ntBASIC2.51□□□□□ -2.01
Col6a6Q8C6K9 Mir21a-201ENSMUST00000083521 92 ntBASIC2.51□□□□□ -2.01
Col6a6Q8C6K9 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
Col6a6Q8C6K9 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Col6a6Q8C6K9 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Col6a6Q8C6K9 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Col6a6Q8C6K9 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Col6a6Q8C6K9 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Col6a6Q8C6K9 Gm12788-201ENSMUST00000119090 308 ntBASIC2.51□□□□□ -2.01
Col6a6Q8C6K9 Gm13009-201ENSMUST00000121307 267 ntBASIC2.51□□□□□ -2.01
Col6a6Q8C6K9 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Col6a6Q8C6K9 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Col6a6Q8C6K9 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms