Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim35Q8C006 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim35Q8C006 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC6.81□□□□□ -1.32
Trim35Q8C006 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim35Q8C006 Gm22496-201ENSMUST00000104493 88 ntBASIC6.81□□□□□ -1.32
Trim35Q8C006 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC6.81□□□□□ -1.32
Trim35Q8C006 Gm22316-201ENSMUST00000158012 216 ntBASIC6.81□□□□□ -1.32
Trim35Q8C006 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Trim35Q8C006 Gm25633-201ENSMUST00000178565 107 ntBASIC6.81□□□□□ -1.32
Trim35Q8C006 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC6.81□□□□□ -1.32
Trim35Q8C006 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC6.81□□□□□ -1.32
Trim35Q8C006 Gm9985-201ENSMUST00000044101 510 ntBASIC6.81□□□□□ -1.32
Trim35Q8C006 Gm22061-201ENSMUST00000082557 107 ntBASIC6.81□□□□□ -1.32
Trim35Q8C006 Gm22805-201ENSMUST00000082739 107 ntBASIC6.81□□□□□ -1.32
Trim35Q8C006 Gm25705-201ENSMUST00000083119 104 ntBASIC6.81□□□□□ -1.32
Trim35Q8C006 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC6.81□□□□□ -1.32
Trim35Q8C006 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim35Q8C006 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Trim35Q8C006 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim35Q8C006 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Trim35Q8C006 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
Trim35Q8C006 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Trim35Q8C006 Gm35629-201ENSMUST00000209684 2241 ntBASIC6.81□□□□□ -1.32
Trim35Q8C006 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Trim35Q8C006 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Trim35Q8C006 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim35Q8C006 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Trim35Q8C006 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Trim35Q8C006 Gm44194-201ENSMUST00000204222 3229 ntBASIC6.8□□□□□ -1.32
Trim35Q8C006 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Trim35Q8C006 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC6.8□□□□□ -1.32
Trim35Q8C006 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Trim35Q8C006 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Trim35Q8C006 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Trim35Q8C006 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Trim35Q8C006 Mir697-201ENSMUST00000102316 109 ntBASIC6.8□□□□□ -1.32
Trim35Q8C006 Gm22781-201ENSMUST00000104083 137 ntBASIC6.8□□□□□ -1.32
Trim35Q8C006 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC6.8□□□□□ -1.32
Trim35Q8C006 Gm14977-201ENSMUST00000121626 812 ntBASIC6.8□□□□□ -1.32
Trim35Q8C006 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC6.8□□□□□ -1.32
Trim35Q8C006 Mir1929-201ENSMUST00000158635 93 ntBASIC6.8□□□□□ -1.32
Trim35Q8C006 Gm5430-201ENSMUST00000182525 915 ntBASIC6.8□□□□□ -1.32
Trim35Q8C006 Gm27360-201ENSMUST00000183487 80 ntBASIC6.8□□□□□ -1.32
Trim35Q8C006 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC6.8□□□□□ -1.32
Trim35Q8C006 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Trim35Q8C006 Gm3511-201ENSMUST00000199823 204 ntBASIC6.8□□□□□ -1.32
Trim35Q8C006 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC6.8□□□□□ -1.32
Trim35Q8C006 Gm45710-201ENSMUST00000212847 215 ntBASIC6.8□□□□□ -1.32
Trim35Q8C006 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
Trim35Q8C006 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC6.8□□□□□ -1.32
Trim35Q8C006 CU062626.2-201ENSMUST00000223953 274 ntBASIC6.8□□□□□ -1.32
Trim35Q8C006 AC122418.1-201ENSMUST00000225012 511 ntBASIC6.8□□□□□ -1.32
Trim35Q8C006 AC138329.1-201ENSMUST00000225040 471 ntBASIC6.8□□□□□ -1.32
Trim35Q8C006 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Trim35Q8C006 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Trim35Q8C006 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Trim35Q8C006 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
Trim35Q8C006 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Trim35Q8C006 AC107763.1-202ENSMUST00000225021 2663 ntBASIC6.8□□□□□ -1.32
Trim35Q8C006 Gm29325-201ENSMUST00000190705 2528 ntBASIC6.8□□□□□ -1.32
Trim35Q8C006 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
Trim35Q8C006 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC6.8□□□□□ -1.32
Trim35Q8C006 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Trim35Q8C006 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Trim35Q8C006 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Trim35Q8C006 Gm11242-201ENSMUST00000120103 2457 ntBASIC6.79□□□□□ -1.32
Trim35Q8C006 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim35Q8C006 AC091683.1-201ENSMUST00000222307 2446 ntBASIC6.79□□□□□ -1.32
Trim35Q8C006 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim35Q8C006 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim35Q8C006 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim35Q8C006 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim35Q8C006 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim35Q8C006 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim35Q8C006 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim35Q8C006 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim35Q8C006 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC6.79□□□□□ -1.32
Trim35Q8C006 Mir690-201ENSMUST00000102110 109 ntBASIC6.79□□□□□ -1.32
Trim35Q8C006 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Trim35Q8C006 Gm12449-201ENSMUST00000117572 234 ntBASIC6.79□□□□□ -1.32
Trim35Q8C006 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC6.79□□□□□ -1.32
Trim35Q8C006 Gm22728-201ENSMUST00000158087 129 ntBASIC6.79□□□□□ -1.32
Trim35Q8C006 Gm25048-201ENSMUST00000158598 91 ntBASIC6.79□□□□□ -1.32
Trim35Q8C006 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC6.79□□□□□ -1.32
Trim35Q8C006 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Trim35Q8C006 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC6.79□□□□□ -1.32
Trim35Q8C006 Mir3473g-201ENSMUST00000183494 136 ntBASIC6.79□□□□□ -1.32
Trim35Q8C006 Ighv5-5-201ENSMUST00000193826 329 ntBASIC6.79□□□□□ -1.32
Trim35Q8C006 AC155709.1-201ENSMUST00000218794 162 ntBASIC6.79□□□□□ -1.32
Trim35Q8C006 Gm31711-201ENSMUST00000220687 196 ntBASIC6.79□□□□□ -1.32
Trim35Q8C006 AC166105.1-201ENSMUST00000227512 482 ntBASIC6.79□□□□□ -1.32
Trim35Q8C006 n-R5s97-201ENSMUST00000082585 113 ntBASIC6.79□□□□□ -1.32
Trim35Q8C006 Gm22806-201ENSMUST00000082738 136 ntBASIC6.79□□□□□ -1.32
Trim35Q8C006 Gm22353-201ENSMUST00000083918 136 ntBASIC6.79□□□□□ -1.32
Trim35Q8C006 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim35Q8C006 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC6.79□□□□□ -1.32
Trim35Q8C006 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Trim35Q8C006 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
Trim35Q8C006 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
Trim35Q8C006 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms